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LINC01197 (long intergenic non-protein coding RNA 1197)

Identity

Other alias-
HGNC (Hugo) LINC01197
LocusID (NCBI) 400456
Atlas_Id 65850
Location 15q26.2  [Link to chromosome band 15q26]
Location_base_pair Starts at 95279290 and ends at 95327100 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01197   49597
Cards
Entrez_Gene (NCBI)LINC01197  400456  long intergenic non-protein coding RNA 1197
Aliases
GeneCards (Weizmann)LINC01197
Ensembl hg19 (Hinxton)ENSG00000248441 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248441 [Gene_View]  chr15:95279290-95327100 [Contig_View]  LINC01197 [Vega]
ICGC DataPortalENSG00000248441
TCGA cBioPortalLINC01197
AceView (NCBI)LINC01197
Genatlas (Paris)LINC01197
WikiGenes400456
SOURCE (Princeton)LINC01197
Genetics Home Reference (NIH)LINC01197
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01197  -     chr15:95279290-95327100 -  15q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01197  -     15q26.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01197 - 15q26.2 [CytoView hg19]  LINC01197 - 15q26.2 [CytoView hg38]
Mapping of homologs : NCBILINC01197 [Mapview hg19]  LINC01197 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040875
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01197
Cluster EST : UnigeneHs.536404 [ NCBI ]
CGAP (NCI)Hs.536404
Alternative Splicing GalleryENSG00000248441
Gene ExpressionLINC01197 [ NCBI-GEO ]   LINC01197 [ EBI - ARRAY_EXPRESS ]   LINC01197 [ SEEK ]   LINC01197 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01197 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400456
GTEX Portal (Tissue expression)LINC01197
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01197
DMDM Disease mutations400456
Blocks (Seattle)LINC01197
Human Protein AtlasENSG00000248441
Protein Interaction databases
FunCoupENSG00000248441
BioGRIDLINC01197
STRING (EMBL)LINC01197
ZODIACLINC01197
Ontologies - Pathways
Huge Navigator LINC01197 [HugePedia]
snp3D : Map Gene to Disease400456
BioCentury BCIQLINC01197
ClinGenLINC01197
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400456
Clinical trialLINC01197
Miscellaneous
canSAR (ICR)LINC01197 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01197
EVEXLINC01197
GoPubMedLINC01197
iHOPLINC01197
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:22 CEST 2017

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