Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01202 (long intergenic non-protein coding RNA 1202)

Identity

Other alias-
HGNC (Hugo) LINC01202
LocusID (NCBI) 104326188
Atlas_Id 77274
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 161910462 and ends at 162001196 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01202   49633
Cards
Entrez_Gene (NCBI)LINC01202  104326188  long intergenic non-protein coding RNA 1202
Aliases
GeneCards (Weizmann)LINC01202
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:161910462-162001196 [Contig_View]  LINC01202 [Vega]
TCGA cBioPortalLINC01202
AceView (NCBI)LINC01202
Genatlas (Paris)LINC01202
WikiGenes104326188
SOURCE (Princeton)LINC01202
Genetics Home Reference (NIH)LINC01202
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01202  -     chr5:161910462-162001196 -  5q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01202  -     5q34   [Description]    (hg19-Feb_2009)
EnsemblLINC01202 - 5q34 [CytoView hg19]  LINC01202 - 5q34 [CytoView hg38]
Mapping of homologs : NCBILINC01202 [Mapview hg19]  LINC01202 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI755689
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01202
Gene ExpressionLINC01202 [ NCBI-GEO ]   LINC01202 [ EBI - ARRAY_EXPRESS ]   LINC01202 [ SEEK ]   LINC01202 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01202 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104326188
GTEX Portal (Tissue expression)LINC01202
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01202
DMDM Disease mutations104326188
Blocks (Seattle)LINC01202
Protein Interaction databases
BioGRIDLINC01202
STRING (EMBL)LINC01202
ZODIACLINC01202
Ontologies - Pathways
Huge Navigator LINC01202 [HugePedia]
snp3D : Map Gene to Disease104326188
BioCentury BCIQLINC01202
ClinGenLINC01202
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104326188
Clinical trialLINC01202
Miscellaneous
canSAR (ICR)LINC01202 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01202
EVEXLINC01202
GoPubMedLINC01202
iHOPLINC01202
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:46 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.