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LINC01210 (long intergenic non-protein coding RNA 1210)

Identity

Other alias-
HGNC (Hugo) LINC01210
LocusID (NCBI) 100507274
Atlas_Id 65859
Location 3q22.3  [Link to chromosome band 3q22]
Location_base_pair Starts at 137771911 and ends at 137780877 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01210   49642
Cards
Entrez_Gene (NCBI)LINC01210  100507274  long intergenic non-protein coding RNA 1210
Aliases
GeneCards (Weizmann)LINC01210
Ensembl hg19 (Hinxton)ENSG00000239513 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239513 [Gene_View]  chr3:137771911-137780877 [Contig_View]  LINC01210 [Vega]
ICGC DataPortalENSG00000239513
TCGA cBioPortalLINC01210
AceView (NCBI)LINC01210
Genatlas (Paris)LINC01210
WikiGenes100507274
SOURCE (Princeton)LINC01210
Genetics Home Reference (NIH)LINC01210
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01210  -     chr3:137771911-137780877 +  3q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01210  -     3q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01210 - 3q22.3 [CytoView hg19]  LINC01210 - 3q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01210 [Mapview hg19]  LINC01210 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038725 BI460052
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01210
Cluster EST : UnigeneHs.360349 [ NCBI ]
CGAP (NCI)Hs.360349
Alternative Splicing GalleryENSG00000239513
Gene ExpressionLINC01210 [ NCBI-GEO ]   LINC01210 [ EBI - ARRAY_EXPRESS ]   LINC01210 [ SEEK ]   LINC01210 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01210 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507274
GTEX Portal (Tissue expression)LINC01210
Human Protein AtlasENSG00000239513-LINC01210 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01210
DMDM Disease mutations100507274
Blocks (Seattle)LINC01210
Human Protein Atlas [tissue]ENSG00000239513-LINC01210 [tissue]
Protein Interaction databases
FunCoupENSG00000239513
BioGRIDLINC01210
STRING (EMBL)LINC01210
ZODIACLINC01210
Ontologies - Pathways
Huge Navigator LINC01210 [HugePedia]
snp3D : Map Gene to Disease100507274
BioCentury BCIQLINC01210
ClinGenLINC01210
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507274
Clinical trialLINC01210
Miscellaneous
canSAR (ICR)LINC01210 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01210
EVEXLINC01210
GoPubMedLINC01210
iHOPLINC01210
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:07:56 CET 2017

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