Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01219 (long intergenic non-protein coding RNA 1219)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01219
LocusID (NCBI) 104355220
Atlas_Id 76589
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 1991096 and ends at 1993469 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01219   49653
Cards
Entrez_Gene (NCBI)LINC01219    long intergenic non-protein coding RNA 1219
Aliases
GeneCards (Weizmann)LINC01219
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:1991096-1993469 [Contig_View]  LINC01219 [Vega]
TCGA cBioPortalLINC01219
AceView (NCBI)LINC01219
Genatlas (Paris)LINC01219
SOURCE (Princeton)LINC01219
Genetics Home Reference (NIH)LINC01219
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01219  -     chr11:1991096-1993469 +  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01219  -     11p15.5   [Description]    (hg19-Feb_2009)
GoldenPathLINC01219 - 11p15.5 [CytoView hg19]  LINC01219 - 11p15.5 [CytoView hg38]
genome Data Viewer NCBILINC01219 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX092271
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01219
Gene ExpressionLINC01219 [ NCBI-GEO ]   LINC01219 [ EBI - ARRAY_EXPRESS ]   LINC01219 [ SEEK ]   LINC01219 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01219 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01219 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)104355220
GTEX Portal (Tissue expression)LINC01219
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01219
Blocks (Seattle)LINC01219
Protein Interaction databases
BioGRIDLINC01219
STRING (EMBL)LINC01219
ZODIACLINC01219
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01219
EVEXLINC01219
GoPubMedLINC01219
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:01:50 CET 2020

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