Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01221 (long intergenic non-protein coding RNA 1221)


Alias (NCBI)TCONS_00000366
HGNC (Hugo) LINC01221
HGNC Alias symbTCONS_00000366
LocusID (NCBI) 104266961
Atlas_Id 76641
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 199016133 and ends at 199076735 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01221   49671
Entrez_Gene (NCBI)LINC01221    long intergenic non-protein coding RNA 1221
GeneCards (Weizmann)LINC01221
Ensembl hg19 (Hinxton)ENSG00000235492 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235492 [Gene_View]  ENSG00000235492 [Sequence]  chr1:199016133-199076735 [Contig_View]  LINC01221 [Vega]
ICGC DataPortalENSG00000235492
TCGA cBioPortalLINC01221
AceView (NCBI)LINC01221
Genatlas (Paris)LINC01221
SOURCE (Princeton)LINC01221
Genetics Home Reference (NIH)LINC01221
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01221  -     chr1:199016133-199076735 +  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01221  -     1q32.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01221 - 1q32.1 [CytoView hg19]  LINC01221 - 1q32.1 [CytoView hg38]
Genome Data Viewer NCBILINC01221 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BG613973
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01221
Gene ExpressionLINC01221 [ NCBI-GEO ]   LINC01221 [ EBI - ARRAY_EXPRESS ]   LINC01221 [ SEEK ]   LINC01221 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01221 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01221 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)104266961
GTEX Portal (Tissue expression)LINC01221
Human Protein AtlasENSG00000235492-LINC01221 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01221
Human Protein Atlas [tissue]ENSG00000235492-LINC01221 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:23 CEST 2021

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