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LINC01221 (long intergenic non-protein coding RNA 1221)

Identity

Alias_symbol (synonym)TCONS_00000366
Other alias
HGNC (Hugo) LINC01221
LocusID (NCBI) 104266961
Atlas_Id 76641
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 198985262 and ends at 199045864 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01221   49671
Cards
Entrez_Gene (NCBI)LINC01221  104266961  long intergenic non-protein coding RNA 1221
AliasesTCONS_00000366
GeneCards (Weizmann)LINC01221
Ensembl hg19 (Hinxton)ENSG00000235492 [Gene_View]  chr1:198985262-199045864 [Contig_View]  LINC01221 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235492 [Gene_View]  chr1:198985262-199045864 [Contig_View]  LINC01221 [Vega]
ICGC DataPortalENSG00000235492
TCGA cBioPortalLINC01221
AceView (NCBI)LINC01221
Genatlas (Paris)LINC01221
WikiGenes104266961
SOURCE (Princeton)LINC01221
Genetics Home Reference (NIH)LINC01221
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01221  -     chr1:198985262-199045864 +  1q32.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01221  -     1q32.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01221 - 1q32.1 [CytoView hg19]  LINC01221 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC01221 [Mapview hg19]  LINC01221 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG613973 HG493058
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)LINC01221
Cluster EST : UnigeneHs.576501 [ NCBI ]
CGAP (NCI)Hs.576501
Alternative Splicing GalleryENSG00000235492
Gene ExpressionLINC01221 [ NCBI-GEO ]   LINC01221 [ EBI - ARRAY_EXPRESS ]   LINC01221 [ SEEK ]   LINC01221 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01221 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104266961
GTEX Portal (Tissue expression)LINC01221
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01221
DMDM Disease mutations104266961
Blocks (Seattle)LINC01221
Human Protein AtlasENSG00000235492
Protein Interaction databases
FunCoupENSG00000235492
BioGRIDLINC01221
STRING (EMBL)LINC01221
ZODIACLINC01221
Ontologies - Pathways
Huge Navigator LINC01221 [HugePedia]
snp3D : Map Gene to Disease104266961
BioCentury BCIQLINC01221
ClinGenLINC01221
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104266961
Clinical trialLINC01221
Miscellaneous
canSAR (ICR)LINC01221 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01221
EVEXLINC01221
GoPubMedLINC01221
iHOPLINC01221
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:13:23 CET 2017

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