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LINC01225 (long intergenic non-protein coding RNA 1225)

Identity

Other alias-
HGNC (Hugo) LINC01225
LocusID (NCBI) 149086
Atlas_Id 65868
Location 1p35.2  [Link to chromosome band 1p35]
Location_base_pair Starts at 31971839 and ends at 31974167 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01225   49677
Cards
Entrez_Gene (NCBI)LINC01225  149086  long intergenic non-protein coding RNA 1225
Aliases
GeneCards (Weizmann)LINC01225
Ensembl hg19 (Hinxton)ENSG00000260386 [Gene_View]  chr1:31971839-31974167 [Contig_View]  LINC01225 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260386 [Gene_View]  chr1:31971839-31974167 [Contig_View]  LINC01225 [Vega]
ICGC DataPortalENSG00000260386
TCGA cBioPortalLINC01225
AceView (NCBI)LINC01225
Genatlas (Paris)LINC01225
WikiGenes149086
SOURCE (Princeton)LINC01225
Genetics Home Reference (NIH)LINC01225
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01225  -     chr1:31971839-31974167 +  1p35.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01225  -     1p35.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01225 - 1p35.2 [CytoView hg19]  LINC01225 - 1p35.2 [CytoView hg38]
Mapping of homologs : NCBILINC01225 [Mapview hg19]  LINC01225 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057562 BC036357 BC104454 BC104455 DB342154
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)LINC01225
Cluster EST : UnigeneHs.729905 [ NCBI ]
CGAP (NCI)Hs.729905
Alternative Splicing GalleryENSG00000260386
Gene ExpressionLINC01225 [ NCBI-GEO ]   LINC01225 [ EBI - ARRAY_EXPRESS ]   LINC01225 [ SEEK ]   LINC01225 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01225 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)149086
GTEX Portal (Tissue expression)LINC01225
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01225
DMDM Disease mutations149086
Blocks (Seattle)LINC01225
Human Protein AtlasENSG00000260386
IPIIPI00884397   IPI00920958   
Protein Interaction databases
FunCoupENSG00000260386
BioGRIDLINC01225
STRING (EMBL)LINC01225
ZODIACLINC01225
Ontologies - Pathways
Huge Navigator LINC01225 [HugePedia]
snp3D : Map Gene to Disease149086
BioCentury BCIQLINC01225
ClinGenLINC01225
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149086
Clinical trialLINC01225
Miscellaneous
canSAR (ICR)LINC01225 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01225
EVEXLINC01225
GoPubMedLINC01225
iHOPLINC01225
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:24 CET 2017

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