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LINC01227 (long intergenic non-protein coding RNA 1227)

Identity

Other alias-
HGNC (Hugo) LINC01227
LocusID (NCBI) 101928276
Atlas_Id 65870
Location 16q23.2  [Link to chromosome band 16q23]
Location_base_pair Starts at 80567555 and ends at 80569610 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01227   49680
Cards
Entrez_Gene (NCBI)LINC01227  101928276  long intergenic non-protein coding RNA 1227
Aliases
GeneCards (Weizmann)LINC01227
Ensembl hg19 (Hinxton)ENSG00000260737 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260737 [Gene_View]  chr16:80567555-80569610 [Contig_View]  LINC01227 [Vega]
ICGC DataPortalENSG00000260737
TCGA cBioPortalLINC01227
AceView (NCBI)LINC01227
Genatlas (Paris)LINC01227
WikiGenes101928276
SOURCE (Princeton)LINC01227
Genetics Home Reference (NIH)LINC01227
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01227  -     chr16:80567555-80569610 -  16q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01227  -     16q23.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01227 - 16q23.2 [CytoView hg19]  LINC01227 - 16q23.2 [CytoView hg38]
Mapping of homologs : NCBILINC01227 [Mapview hg19]  LINC01227 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098656 BX100000
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01227
Cluster EST : UnigeneHs.149769 [ NCBI ]
CGAP (NCI)Hs.149769
Alternative Splicing GalleryENSG00000260737
Gene ExpressionLINC01227 [ NCBI-GEO ]   LINC01227 [ EBI - ARRAY_EXPRESS ]   LINC01227 [ SEEK ]   LINC01227 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01227 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928276
GTEX Portal (Tissue expression)LINC01227
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01227
DMDM Disease mutations101928276
Blocks (Seattle)LINC01227
Human Protein AtlasENSG00000260737
Protein Interaction databases
FunCoupENSG00000260737
BioGRIDLINC01227
STRING (EMBL)LINC01227
ZODIACLINC01227
Ontologies - Pathways
Huge Navigator LINC01227 [HugePedia]
snp3D : Map Gene to Disease101928276
BioCentury BCIQLINC01227
ClinGenLINC01227
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928276
Clinical trialLINC01227
Miscellaneous
canSAR (ICR)LINC01227 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01227
EVEXLINC01227
GoPubMedLINC01227
iHOPLINC01227
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:28 CEST 2017

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