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LINC01229 (long intergenic non-protein coding RNA 1229)

Identity

Alias_symbol (synonym)TCONS_00024480
Other alias-
HGNC (Hugo) LINC01229
LocusID (NCBI) 101928248
Atlas_Id 65871
Location 16q23.2  [Link to chromosome band 16q23]
Location_base_pair Starts at 79804368 and ends at 79835240 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01229   49682
Cards
Entrez_Gene (NCBI)LINC01229  101928248  long intergenic non-protein coding RNA 1229
Aliases
GeneCards (Weizmann)LINC01229
Ensembl hg19 (Hinxton)ENSG00000260876 [Gene_View]  chr16:79804368-79835240 [Contig_View]  LINC01229 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260876 [Gene_View]  chr16:79804368-79835240 [Contig_View]  LINC01229 [Vega]
ICGC DataPortalENSG00000260876
TCGA cBioPortalLINC01229
AceView (NCBI)LINC01229
Genatlas (Paris)LINC01229
WikiGenes101928248
SOURCE (Princeton)LINC01229
Genetics Home Reference (NIH)LINC01229
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01229  -     chr16:79804368-79835240 +  16q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01229  -     16q23.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01229 - 16q23.2 [CytoView hg19]  LINC01229 - 16q23.2 [CytoView hg38]
Mapping of homologs : NCBILINC01229 [Mapview hg19]  LINC01229 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI206555 BQ189302 BX116522 CK299455 HG508320
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)LINC01229
Cluster EST : UnigeneHs.659802 [ NCBI ]
CGAP (NCI)Hs.659802
Alternative Splicing GalleryENSG00000260876
Gene ExpressionLINC01229 [ NCBI-GEO ]   LINC01229 [ EBI - ARRAY_EXPRESS ]   LINC01229 [ SEEK ]   LINC01229 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01229 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928248
GTEX Portal (Tissue expression)LINC01229
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01229
DMDM Disease mutations101928248
Blocks (Seattle)LINC01229
Human Protein AtlasENSG00000260876
Protein Interaction databases
FunCoupENSG00000260876
BioGRIDLINC01229
STRING (EMBL)LINC01229
ZODIACLINC01229
Ontologies - Pathways
Huge Navigator LINC01229 [HugePedia]
snp3D : Map Gene to Disease101928248
BioCentury BCIQLINC01229
ClinGenLINC01229
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928248
Clinical trialLINC01229
Miscellaneous
canSAR (ICR)LINC01229 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01229
EVEXLINC01229
GoPubMedLINC01229
iHOPLINC01229
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:24 CET 2017

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