Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01230 (long intergenic non-protein coding RNA 1230)


Alias (NCBI)TCONS_00015639
HGNC (Hugo) LINC01230
HGNC Alias symblinc-DMRT2
LocusID (NCBI) 102800446
Atlas_Id 65872
Location 9p24.3  [Link to chromosome band 9p24]
Location_base_pair Starts at 1048143 and ends at 1048640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01230   49686
Entrez_Gene (NCBI)LINC01230    long intergenic non-protein coding RNA 1230
AliasesTCONS_00015639; linc-DMRT2; lnc-DRMT2
GeneCards (Weizmann)LINC01230
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr9:1048143-1048640 [Contig_View]  LINC01230 [Vega]
TCGA cBioPortalLINC01230
AceView (NCBI)LINC01230
Genatlas (Paris)LINC01230
SOURCE (Princeton)LINC01230
Genetics Home Reference (NIH)LINC01230
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01230  -     chr9:1048143-1048640 +  9p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01230  -     9p24.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01230 - 9p24.3 [CytoView hg19]  LINC01230 - 9p24.3 [CytoView hg38]
Genome Data Viewer NCBILINC01230 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI950300 AK055761
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01230
Gene ExpressionLINC01230 [ NCBI-GEO ]   LINC01230 [ EBI - ARRAY_EXPRESS ]   LINC01230 [ SEEK ]   LINC01230 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01230 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01230 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102800446
GTEX Portal (Tissue expression)LINC01230
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01230
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:57:25 CEST 2021

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