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LINC01235 (long intergenic non-protein coding RNA 1235)

Identity

Alias_symbol (synonym)FLJ41200
Other alias-
HGNC (Hugo) LINC01235
LocusID (NCBI) 401492
Atlas_Id 65877
Location 9p23  [Link to chromosome band 9p23]
Location_base_pair Starts at 13406379 and ends at 13431328 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01235   49769
Cards
Entrez_Gene (NCBI)LINC01235  401492  long intergenic non-protein coding RNA 1235
Aliases
GeneCards (Weizmann)LINC01235
Ensembl hg19 (Hinxton)ENSG00000270547 [Gene_View]  chr9:13406379-13431328 [Contig_View]  LINC01235 [Vega]
Ensembl hg38 (Hinxton)ENSG00000270547 [Gene_View]  chr9:13406379-13431328 [Contig_View]  LINC01235 [Vega]
ICGC DataPortalENSG00000270547
TCGA cBioPortalLINC01235
AceView (NCBI)LINC01235
Genatlas (Paris)LINC01235
WikiGenes401492
SOURCE (Princeton)LINC01235
Genetics Home Reference (NIH)LINC01235
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01235  -     chr9:13406379-13431328 -  9p23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01235  -     9p23   [Description]    (hg38-Dec_2013)
EnsemblLINC01235 - 9p23 [CytoView hg19]  LINC01235 - 9p23 [CytoView hg38]
Mapping of homologs : NCBILINC01235 [Mapview hg19]  LINC01235 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI949399 AK123194 HG501897 HG501898
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)LINC01235
Cluster EST : UnigeneHs.632651 [ NCBI ]
CGAP (NCI)Hs.632651
Alternative Splicing GalleryENSG00000270547
Gene ExpressionLINC01235 [ NCBI-GEO ]   LINC01235 [ EBI - ARRAY_EXPRESS ]   LINC01235 [ SEEK ]   LINC01235 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01235 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401492
GTEX Portal (Tissue expression)LINC01235
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01235
DMDM Disease mutations401492
Blocks (Seattle)LINC01235
Human Protein AtlasENSG00000270547
Protein Interaction databases
FunCoupENSG00000270547
BioGRIDLINC01235
STRING (EMBL)LINC01235
ZODIACLINC01235
Ontologies - Pathways
Huge Navigator LINC01235 [HugePedia]
snp3D : Map Gene to Disease401492
BioCentury BCIQLINC01235
ClinGenLINC01235
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401492
Clinical trialLINC01235
Miscellaneous
canSAR (ICR)LINC01235 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01235
EVEXLINC01235
GoPubMedLINC01235
iHOPLINC01235
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:26 CET 2017

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