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LINC01239 (long intergenic non-protein coding RNA 1239)

Identity

Other alias-
HGNC (Hugo) LINC01239
LocusID (NCBI) 441389
Atlas_Id 65879
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 22646200 and ends at 22824213 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01239   49796
Cards
Entrez_Gene (NCBI)LINC01239  441389  long intergenic non-protein coding RNA 1239
Aliases
GeneCards (Weizmann)LINC01239
Ensembl hg19 (Hinxton)ENSG00000234840 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234840 [Gene_View]  chr9:22646200-22824213 [Contig_View]  LINC01239 [Vega]
ICGC DataPortalENSG00000234840
TCGA cBioPortalLINC01239
AceView (NCBI)LINC01239
Genatlas (Paris)LINC01239
WikiGenes441389
SOURCE (Princeton)LINC01239
Genetics Home Reference (NIH)LINC01239
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01239  -     chr9:22646200-22824213 +  9p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01239  -     9p21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01239 - 9p21.3 [CytoView hg19]  LINC01239 - 9p21.3 [CytoView hg38]
Mapping of homologs : NCBILINC01239 [Mapview hg19]  LINC01239 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092601
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01239
Alternative Splicing GalleryENSG00000234840
Gene ExpressionLINC01239 [ NCBI-GEO ]   LINC01239 [ EBI - ARRAY_EXPRESS ]   LINC01239 [ SEEK ]   LINC01239 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01239 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441389
GTEX Portal (Tissue expression)LINC01239
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01239
DMDM Disease mutations441389
Blocks (Seattle)LINC01239
Human Protein AtlasENSG00000234840
IPIIPI00746297   
Protein Interaction databases
FunCoupENSG00000234840
BioGRIDLINC01239
STRING (EMBL)LINC01239
ZODIACLINC01239
Ontologies - Pathways
Huge Navigator LINC01239 [HugePedia]
snp3D : Map Gene to Disease441389
BioCentury BCIQLINC01239
ClinGenLINC01239
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441389
Clinical trialLINC01239
Miscellaneous
canSAR (ICR)LINC01239 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01239
EVEXLINC01239
GoPubMedLINC01239
iHOPLINC01239
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:31 CEST 2017

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