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LINC01252 (long intergenic non-protein coding RNA 1252)

Identity

Other alias-
HGNC (Hugo) LINC01252
LocusID (NCBI) 338817
Atlas_Id 65889
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11548030 and ends at 11564401 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01252   27888
Cards
Entrez_Gene (NCBI)LINC01252  338817  long intergenic non-protein coding RNA 1252
Aliases
GeneCards (Weizmann)LINC01252
Ensembl hg19 (Hinxton)ENSG00000247157 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247157 [Gene_View]  chr12:11548030-11564401 [Contig_View]  LINC01252 [Vega]
ICGC DataPortalENSG00000247157
TCGA cBioPortalLINC01252
AceView (NCBI)LINC01252
Genatlas (Paris)LINC01252
WikiGenes338817
SOURCE (Princeton)LINC01252
Genetics Home Reference (NIH)LINC01252
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01252  -     chr12:11548030-11564401 +  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01252  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01252 - 12p13.2 [CytoView hg19]  LINC01252 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBILINC01252 [Mapview hg19]  LINC01252 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041827
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01252
Cluster EST : UnigeneHs.733066 [ NCBI ]
CGAP (NCI)Hs.733066
Alternative Splicing GalleryENSG00000247157
Gene ExpressionLINC01252 [ NCBI-GEO ]   LINC01252 [ EBI - ARRAY_EXPRESS ]   LINC01252 [ SEEK ]   LINC01252 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01252 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338817
GTEX Portal (Tissue expression)LINC01252
Human Protein AtlasENSG00000247157-LINC01252 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01252
DMDM Disease mutations338817
Blocks (Seattle)LINC01252
Human Protein Atlas [tissue]ENSG00000247157-LINC01252 [tissue]
Protein Interaction databases
FunCoupENSG00000247157
BioGRIDLINC01252
STRING (EMBL)LINC01252
ZODIACLINC01252
Ontologies - Pathways
Huge Navigator LINC01252 [HugePedia]
snp3D : Map Gene to Disease338817
BioCentury BCIQLINC01252
ClinGenLINC01252
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338817
Clinical trialLINC01252
Miscellaneous
canSAR (ICR)LINC01252 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01252
EVEXLINC01252
GoPubMedLINC01252
iHOPLINC01252
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:54 CET 2017

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