Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01254 (long intergenic non-protein coding RNA 1254)

Identity

Other alias-
HGNC (Hugo) LINC01254
LocusID (NCBI) 101927350
Atlas_Id 65890
Location 18p11.22  [Link to chromosome band 18p11]
Location_base_pair Starts at 10405130 and ends at 10414367 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01254   49870
Cards
Entrez_Gene (NCBI)LINC01254  101927350  long intergenic non-protein coding RNA 1254
Aliases
GeneCards (Weizmann)LINC01254
Ensembl hg19 (Hinxton)ENSG00000260913 [Gene_View]  chr18:10405130-10414367 [Contig_View]  LINC01254 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260913 [Gene_View]  chr18:10405130-10414367 [Contig_View]  LINC01254 [Vega]
ICGC DataPortalENSG00000260913
TCGA cBioPortalLINC01254
AceView (NCBI)LINC01254
Genatlas (Paris)LINC01254
WikiGenes101927350
SOURCE (Princeton)LINC01254
Genetics Home Reference (NIH)LINC01254
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01254  -     chr18:10405130-10414367 -  18p11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01254  -     18p11.22   [Description]    (hg38-Dec_2013)
EnsemblLINC01254 - 18p11.22 [CytoView hg19]  LINC01254 - 18p11.22 [CytoView hg38]
Mapping of homologs : NCBILINC01254 [Mapview hg19]  LINC01254 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY726567 BC040323 HG509746 HG509747
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010859 NW_004929409
Consensus coding sequences : CCDS (NCBI)LINC01254
Cluster EST : UnigeneHs.738016 [ NCBI ]
CGAP (NCI)Hs.738016
Alternative Splicing GalleryENSG00000260913
Gene ExpressionLINC01254 [ NCBI-GEO ]   LINC01254 [ EBI - ARRAY_EXPRESS ]   LINC01254 [ SEEK ]   LINC01254 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01254 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927350
GTEX Portal (Tissue expression)LINC01254
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01254
DMDM Disease mutations101927350
Blocks (Seattle)LINC01254
Human Protein AtlasENSG00000260913
Protein Interaction databases
FunCoupENSG00000260913
BioGRIDLINC01254
STRING (EMBL)LINC01254
ZODIACLINC01254
Ontologies - Pathways
Huge Navigator LINC01254 [HugePedia]
snp3D : Map Gene to Disease101927350
BioCentury BCIQLINC01254
ClinGenLINC01254
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927350
Clinical trialLINC01254
Miscellaneous
canSAR (ICR)LINC01254 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01254
EVEXLINC01254
GoPubMedLINC01254
iHOPLINC01254
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:29 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.