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LINC01258 (long intergenic non-protein coding RNA 1258)

Identity

Other alias-
HGNC (Hugo) LINC01258
LocusID (NCBI) 101928776
Atlas_Id 65893
Location 4p14  [Link to chromosome band 4p14]
Location_base_pair Starts at 38420662 and ends at 38523180 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01258   49898
Cards
Entrez_Gene (NCBI)LINC01258  101928776  long intergenic non-protein coding RNA 1258
Aliases
GeneCards (Weizmann)LINC01258
Ensembl hg19 (Hinxton)ENSG00000249534 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249534 [Gene_View]  chr4:38420662-38523180 [Contig_View]  LINC01258 [Vega]
ICGC DataPortalENSG00000249534
TCGA cBioPortalLINC01258
AceView (NCBI)LINC01258
Genatlas (Paris)LINC01258
WikiGenes101928776
SOURCE (Princeton)LINC01258
Genetics Home Reference (NIH)LINC01258
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01258  -     chr4:38420662-38523180 -  4p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01258  -     4p14   [Description]    (hg19-Feb_2009)
EnsemblLINC01258 - 4p14 [CytoView hg19]  LINC01258 - 4p14 [CytoView hg38]
Mapping of homologs : NCBILINC01258 [Mapview hg19]  LINC01258 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057434
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01258
Cluster EST : UnigeneHs.586147 [ NCBI ]
CGAP (NCI)Hs.586147
Alternative Splicing GalleryENSG00000249534
Gene ExpressionLINC01258 [ NCBI-GEO ]   LINC01258 [ EBI - ARRAY_EXPRESS ]   LINC01258 [ SEEK ]   LINC01258 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01258 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928776
GTEX Portal (Tissue expression)LINC01258
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01258
DMDM Disease mutations101928776
Blocks (Seattle)LINC01258
Human Protein AtlasENSG00000249534
Protein Interaction databases
FunCoupENSG00000249534
BioGRIDLINC01258
STRING (EMBL)LINC01258
ZODIACLINC01258
Ontologies - Pathways
Huge Navigator LINC01258 [HugePedia]
snp3D : Map Gene to Disease101928776
BioCentury BCIQLINC01258
ClinGenLINC01258
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928776
Clinical trialLINC01258
Miscellaneous
canSAR (ICR)LINC01258 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01258
EVEXLINC01258
GoPubMedLINC01258
iHOPLINC01258
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:34 CEST 2017

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