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LINC01260 (long intergenic non-protein coding RNA 1260)

Identity

Other alias-
HGNC (Hugo) LINC01260
LocusID (NCBI) 79015
Atlas_Id 65894
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 44660578 and ends at 44738967 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01260   49900
Cards
Entrez_Gene (NCBI)LINC01260  79015  long intergenic non-protein coding RNA 1260
Aliases
GeneCards (Weizmann)LINC01260
Ensembl hg19 (Hinxton)ENSG00000132832 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132832 [Gene_View]  chr20:44660578-44738967 [Contig_View]  LINC01260 [Vega]
ICGC DataPortalENSG00000132832
TCGA cBioPortalLINC01260
AceView (NCBI)LINC01260
Genatlas (Paris)LINC01260
WikiGenes79015
SOURCE (Princeton)LINC01260
Genetics Home Reference (NIH)LINC01260
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01260  -     chr20:44660578-44738967 -  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01260  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01260 - 20q13.12 [CytoView hg19]  LINC01260 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC01260 [Mapview hg19]  LINC01260 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090842 BC000849
RefSeq transcript (Entrez)NM_024049
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01260
Cluster EST : UnigeneHs.731918 [ NCBI ]
CGAP (NCI)Hs.731918
Alternative Splicing GalleryENSG00000132832
Gene ExpressionLINC01260 [ NCBI-GEO ]   LINC01260 [ EBI - ARRAY_EXPRESS ]   LINC01260 [ SEEK ]   LINC01260 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01260 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)79015
GTEX Portal (Tissue expression)LINC01260
Human Protein AtlasENSG00000132832-LINC01260 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01260
DMDM Disease mutations79015
Blocks (Seattle)LINC01260
Human Protein Atlas [tissue]ENSG00000132832-LINC01260 [tissue]
IPIIPI00031561   
Protein Interaction databases
FunCoupENSG00000132832
BioGRIDLINC01260
STRING (EMBL)LINC01260
ZODIACLINC01260
Ontologies - Pathways
Huge Navigator LINC01260 [HugePedia]
snp3D : Map Gene to Disease79015
BioCentury BCIQLINC01260
ClinGenLINC01260
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79015
Clinical trialLINC01260
Miscellaneous
canSAR (ICR)LINC01260 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01260
EVEXLINC01260
GoPubMedLINC01260
iHOPLINC01260
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:41 CET 2017

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