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LINC01265 (long intergenic non-protein coding RNA 1265)

Identity

Other alias-
HGNC (Hugo) LINC01265
LocusID (NCBI) 101926904
Atlas_Id 65896
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 38710367 and ends at 38720273 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01265   50297
Cards
Entrez_Gene (NCBI)LINC01265  101926904  long intergenic non-protein coding RNA 1265
Aliases
GeneCards (Weizmann)LINC01265
Ensembl hg19 (Hinxton)ENSG00000249911 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249911 [Gene_View]  chr5:38710367-38720273 [Contig_View]  LINC01265 [Vega]
ICGC DataPortalENSG00000249911
TCGA cBioPortalLINC01265
AceView (NCBI)LINC01265
Genatlas (Paris)LINC01265
WikiGenes101926904
SOURCE (Princeton)LINC01265
Genetics Home Reference (NIH)LINC01265
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01265  -     chr5:38710367-38720273 -  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01265  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01265 - 5p13.1 [CytoView hg19]  LINC01265 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBILINC01265 [Mapview hg19]  LINC01265 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA393775
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01265
Cluster EST : UnigeneHs.634191 [ NCBI ]
CGAP (NCI)Hs.634191
Alternative Splicing GalleryENSG00000249911
Gene ExpressionLINC01265 [ NCBI-GEO ]   LINC01265 [ EBI - ARRAY_EXPRESS ]   LINC01265 [ SEEK ]   LINC01265 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01265 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926904
GTEX Portal (Tissue expression)LINC01265
Human Protein AtlasENSG00000249911-LINC01265 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01265
DMDM Disease mutations101926904
Blocks (Seattle)LINC01265
Human Protein Atlas [tissue]ENSG00000249911-LINC01265 [tissue]
Protein Interaction databases
FunCoupENSG00000249911
BioGRIDLINC01265
STRING (EMBL)LINC01265
ZODIACLINC01265
Ontologies - Pathways
Huge Navigator LINC01265 [HugePedia]
snp3D : Map Gene to Disease101926904
BioCentury BCIQLINC01265
ClinGenLINC01265
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926904
Clinical trialLINC01265
Miscellaneous
canSAR (ICR)LINC01265 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01265
EVEXLINC01265
GoPubMedLINC01265
iHOPLINC01265
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:56 CET 2017

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