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LINC01271 (long intergenic non-protein coding RNA 1271)

Identity

Other alias-
HGNC (Hugo) LINC01271
LocusID (NCBI) 101927586
Atlas_Id 65902
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 50310711 and ends at 50321342 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01271   50327
Cards
Entrez_Gene (NCBI)LINC01271  101927586  long intergenic non-protein coding RNA 1271
Aliases
GeneCards (Weizmann)LINC01271
Ensembl hg19 (Hinxton)ENSG00000233077 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233077 [Gene_View]  chr20:50310711-50321342 [Contig_View]  LINC01271 [Vega]
ICGC DataPortalENSG00000233077
TCGA cBioPortalLINC01271
AceView (NCBI)LINC01271
Genatlas (Paris)LINC01271
WikiGenes101927586
SOURCE (Princeton)LINC01271
Genetics Home Reference (NIH)LINC01271
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01271  -     chr20:50310711-50321342 -  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01271  -     20q13.13   [Description]    (hg19-Feb_2009)
EnsemblLINC01271 - 20q13.13 [CytoView hg19]  LINC01271 - 20q13.13 [CytoView hg38]
Mapping of homologs : NCBILINC01271 [Mapview hg19]  LINC01271 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039367
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01271
Cluster EST : UnigeneHs.637665 [ NCBI ]
CGAP (NCI)Hs.637665
Alternative Splicing GalleryENSG00000233077
Gene ExpressionLINC01271 [ NCBI-GEO ]   LINC01271 [ EBI - ARRAY_EXPRESS ]   LINC01271 [ SEEK ]   LINC01271 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01271 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927586
GTEX Portal (Tissue expression)LINC01271
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01271
DMDM Disease mutations101927586
Blocks (Seattle)LINC01271
Human Protein AtlasENSG00000233077
Protein Interaction databases
FunCoupENSG00000233077
BioGRIDLINC01271
STRING (EMBL)LINC01271
ZODIACLINC01271
Ontologies - Pathways
Huge Navigator LINC01271 [HugePedia]
snp3D : Map Gene to Disease101927586
BioCentury BCIQLINC01271
ClinGenLINC01271
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927586
Clinical trialLINC01271
Miscellaneous
canSAR (ICR)LINC01271 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01271
EVEXLINC01271
GoPubMedLINC01271
iHOPLINC01271
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:36 CEST 2017

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