Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01276 (long intergenic non-protein coding RNA 1276)

Identity

Other alias-
HGNC (Hugo) LINC01276
LocusID (NCBI) 103106903
Atlas_Id 65905
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 41502444 and ends at 41519852 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01276   50333
Cards
Entrez_Gene (NCBI)LINC01276  103106903  long intergenic non-protein coding RNA 1276
Aliases
GeneCards (Weizmann)LINC01276
Ensembl hg19 (Hinxton)ENSG00000226917 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226917 [Gene_View]  ENSG00000226917 [Sequence]  chr6:41502444-41519852 [Contig_View]  LINC01276 [Vega]
ICGC DataPortalENSG00000226917
TCGA cBioPortalLINC01276
AceView (NCBI)LINC01276
Genatlas (Paris)LINC01276
WikiGenes103106903
SOURCE (Princeton)LINC01276
Genetics Home Reference (NIH)LINC01276
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01276  -     chr6:41502444-41519852 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01276  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01276 - 6p21.1 [CytoView hg19]  LINC01276 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01276 [Mapview hg19]  LINC01276 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY927638 DQ141194
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01276
Cluster EST : UnigeneHs.563396 [ NCBI ]
CGAP (NCI)Hs.563396
Alternative Splicing GalleryENSG00000226917
Gene ExpressionLINC01276 [ NCBI-GEO ]   LINC01276 [ EBI - ARRAY_EXPRESS ]   LINC01276 [ SEEK ]   LINC01276 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01276 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103106903
GTEX Portal (Tissue expression)LINC01276
Human Protein AtlasENSG00000226917-LINC01276 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01276
DMDM Disease mutations103106903
Blocks (Seattle)LINC01276
Human Protein Atlas [tissue]ENSG00000226917-LINC01276 [tissue]
Protein Interaction databases
FunCoupENSG00000226917
BioGRIDLINC01276
STRING (EMBL)LINC01276
ZODIACLINC01276
Ontologies - Pathways
Huge Navigator LINC01276 [HugePedia]
snp3D : Map Gene to Disease103106903
BioCentury BCIQLINC01276
ClinGenLINC01276
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103106903
Clinical trialLINC01276
Miscellaneous
canSAR (ICR)LINC01276 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01276
EVEXLINC01276
GoPubMedLINC01276
iHOPLINC01276
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:54:36 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.