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LINC01278 (long intergenic non-protein coding RNA 1278)

Identity

Other alias-
HGNC (Hugo) LINC01278
LocusID (NCBI) 92249
Atlas_Id 65907
Location Xq11.1  [Link to chromosome band Xq11]
Location_base_pair Starts at 63426559 and ends at 63560993 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01278   28090
Cards
Entrez_Gene (NCBI)LINC01278  92249  long intergenic non-protein coding RNA 1278
Aliases
GeneCards (Weizmann)LINC01278
Ensembl hg19 (Hinxton)ENSG00000235437 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235437 [Gene_View]  chrX:63426559-63560993 [Contig_View]  LINC01278 [Vega]
ICGC DataPortalENSG00000235437
TCGA cBioPortalLINC01278
AceView (NCBI)LINC01278
Genatlas (Paris)LINC01278
WikiGenes92249
SOURCE (Princeton)LINC01278
Genetics Home Reference (NIH)LINC01278
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01278  -     chrX:63426559-63560993 -  Xq11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01278  -     Xq11.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01278 - Xq11.1 [CytoView hg19]  LINC01278 - Xq11.1 [CytoView hg38]
Mapping of homologs : NCBILINC01278 [Mapview hg19]  LINC01278 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001756 AK023798 AK129670 AK130294 AL080202
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01278
Cluster EST : UnigeneHs.708316 [ NCBI ]
CGAP (NCI)Hs.708316
Alternative Splicing GalleryENSG00000235437
Gene ExpressionLINC01278 [ NCBI-GEO ]   LINC01278 [ EBI - ARRAY_EXPRESS ]   LINC01278 [ SEEK ]   LINC01278 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01278 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)92249
GTEX Portal (Tissue expression)LINC01278
Human Protein AtlasENSG00000235437-LINC01278 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01278
DMDM Disease mutations92249
Blocks (Seattle)LINC01278
Human Protein Atlas [tissue]ENSG00000235437-LINC01278 [tissue]
IPIIPI00848311   
Protein Interaction databases
FunCoupENSG00000235437
BioGRIDLINC01278
STRING (EMBL)LINC01278
ZODIACLINC01278
Ontologies - Pathways
Huge Navigator LINC01278 [HugePedia]
snp3D : Map Gene to Disease92249
BioCentury BCIQLINC01278
ClinGenLINC01278
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92249
Clinical trialLINC01278
Miscellaneous
canSAR (ICR)LINC01278 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01278
EVEXLINC01278
GoPubMedLINC01278
iHOPLINC01278
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:38:41 CET 2017

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