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LINC01282 (long intergenic non-protein coding RNA 1282)

Identity

Other alias-
HGNC (Hugo) LINC01282
LocusID (NCBI) 101927449
Atlas_Id 65911
Location Xp11.4  [Link to chromosome band Xp11]
Location_base_pair Starts at 39367285 and ends at 39391774 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01282   50338
Cards
Entrez_Gene (NCBI)LINC01282  101927449  long intergenic non-protein coding RNA 1282
Aliases
GeneCards (Weizmann)LINC01282
Ensembl hg19 (Hinxton)ENSG00000236747 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236747 [Gene_View]  chrX:39367285-39391774 [Contig_View]  LINC01282 [Vega]
ICGC DataPortalENSG00000236747
TCGA cBioPortalLINC01282
AceView (NCBI)LINC01282
Genatlas (Paris)LINC01282
WikiGenes101927449
SOURCE (Princeton)LINC01282
Genetics Home Reference (NIH)LINC01282
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01282  -     chrX:39367285-39391774 -  Xp11.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01282  -     Xp11.4   [Description]    (hg19-Feb_2009)
EnsemblLINC01282 - Xp11.4 [CytoView hg19]  LINC01282 - Xp11.4 [CytoView hg38]
Mapping of homologs : NCBILINC01282 [Mapview hg19]  LINC01282 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043536
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01282
Cluster EST : UnigeneHs.553988 [ NCBI ]
CGAP (NCI)Hs.553988
Alternative Splicing GalleryENSG00000236747
Gene ExpressionLINC01282 [ NCBI-GEO ]   LINC01282 [ EBI - ARRAY_EXPRESS ]   LINC01282 [ SEEK ]   LINC01282 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01282 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927449
GTEX Portal (Tissue expression)LINC01282
Human Protein AtlasENSG00000236747-LINC01282 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01282
DMDM Disease mutations101927449
Blocks (Seattle)LINC01282
Human Protein Atlas [tissue]ENSG00000236747-LINC01282 [tissue]
Protein Interaction databases
FunCoupENSG00000236747
BioGRIDLINC01282
STRING (EMBL)LINC01282
ZODIACLINC01282
Ontologies - Pathways
Huge Navigator LINC01282 [HugePedia]
snp3D : Map Gene to Disease101927449
BioCentury BCIQLINC01282
ClinGenLINC01282
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927449
Clinical trialLINC01282
Miscellaneous
canSAR (ICR)LINC01282 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01282
EVEXLINC01282
GoPubMedLINC01282
iHOPLINC01282
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:54 CET 2017

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