Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01287 (long intergenic non-protein coding RNA 1287)


Alias (NCBI)TCONS_l2_00027522
HGNC (Hugo) LINC01287
HGNC Alias symbTCONS_l2_00027522
LocusID (NCBI) 103724390
Atlas_Id 58378
Location 7q36.2  [Link to chromosome band 7q36]
Location_base_pair Starts at 153399919 and ends at 153412234 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01287   50351
Entrez_Gene (NCBI)LINC01287    long intergenic non-protein coding RNA 1287
GeneCards (Weizmann)LINC01287
Ensembl hg19 (Hinxton)ENSG00000234722 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234722 [Gene_View]  ENSG00000234722 [Sequence]  chr7:153399919-153412234 [Contig_View]  LINC01287 [Vega]
ICGC DataPortalENSG00000234722
TCGA cBioPortalLINC01287
AceView (NCBI)LINC01287
Genatlas (Paris)LINC01287
SOURCE (Princeton)LINC01287
Genetics Home Reference (NIH)LINC01287
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01287  -     chr7:153399919-153412234 -  7q36.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01287  -     7q36.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01287 - 7q36.2 [CytoView hg19]  LINC01287 - 7q36.2 [CytoView hg38]
Genome Data Viewer NCBILINC01287 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF514057
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01287
Gene ExpressionLINC01287 [ NCBI-GEO ]   LINC01287 [ EBI - ARRAY_EXPRESS ]   LINC01287 [ SEEK ]   LINC01287 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01287 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01287 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103724390
GTEX Portal (Tissue expression)LINC01287
Human Protein AtlasENSG00000234722-LINC01287 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01287
Human Protein Atlas [tissue]ENSG00000234722-LINC01287 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:15 CEST 2021

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