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LINC01287 (long intergenic non-protein coding RNA 1287)

Identity

Alias (NCBI)TCONS_l2_00027522
HGNC (Hugo) LINC01287
HGNC Alias symbTCONS_l2_00027522
LocusID (NCBI) 103724390
Atlas_Id 58378
Location 7q36.2  [Link to chromosome band 7q36]
Location_base_pair Starts at 153399919 and ends at 153412234 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01287   50351
Cards
Entrez_Gene (NCBI)LINC01287    long intergenic non-protein coding RNA 1287
AliasesTCONS_l2_00027522
GeneCards (Weizmann)LINC01287
Ensembl hg19 (Hinxton)ENSG00000234722 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234722 [Gene_View]  ENSG00000234722 [Sequence]  chr7:153399919-153412234 [Contig_View]  LINC01287 [Vega]
ICGC DataPortalENSG00000234722
TCGA cBioPortalLINC01287
AceView (NCBI)LINC01287
Genatlas (Paris)LINC01287
SOURCE (Princeton)LINC01287
Genetics Home Reference (NIH)LINC01287
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01287  -     chr7:153399919-153412234 -  7q36.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01287  -     7q36.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01287 - 7q36.2 [CytoView hg19]  LINC01287 - 7q36.2 [CytoView hg38]
ImmunoBaseENSG00000234722
Genome Data Viewer NCBILINC01287 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF514057
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01287
Gene ExpressionLINC01287 [ NCBI-GEO ]   LINC01287 [ EBI - ARRAY_EXPRESS ]   LINC01287 [ SEEK ]   LINC01287 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01287 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01287 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103724390
GTEX Portal (Tissue expression)LINC01287
Human Protein AtlasENSG00000234722-LINC01287 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01287
Human Protein Atlas [tissue]ENSG00000234722-LINC01287 [tissue]
Protein Interaction databases
BioGRIDLINC01287
STRING (EMBL)LINC01287
ZODIACLINC01287
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01287
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:15 CEST 2021

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