Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01298 (long intergenic non-protein coding RNA 1298)

Identity

Alias_namesC8orf69
chromosome 8 open reading frame 69
Other alias
HGNC (Hugo) LINC01298
LocusID (NCBI) 619344
Atlas_Id 65920
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 95207007 and ends at 95216374 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01298   32292
Cards
Entrez_Gene (NCBI)LINC01298  619344  long intergenic non-protein coding RNA 1298
AliasesC8orf69
GeneCards (Weizmann)LINC01298
Ensembl hg19 (Hinxton)ENSG00000253351 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253351 [Gene_View]  chr8:95207007-95216374 [Contig_View]  LINC01298 [Vega]
ICGC DataPortalENSG00000253351
TCGA cBioPortalLINC01298
AceView (NCBI)LINC01298
Genatlas (Paris)LINC01298
WikiGenes619344
SOURCE (Princeton)LINC01298
Genetics Home Reference (NIH)LINC01298
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01298  -     chr8:95207007-95216374 -  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01298  -     8q22.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01298 - 8q22.1 [CytoView hg19]  LINC01298 - 8q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC01298 [Mapview hg19]  LINC01298 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA469917 AW103292
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01298
Cluster EST : UnigeneHs.741630 [ NCBI ]
CGAP (NCI)Hs.741630
Alternative Splicing GalleryENSG00000253351
Gene ExpressionLINC01298 [ NCBI-GEO ]   LINC01298 [ EBI - ARRAY_EXPRESS ]   LINC01298 [ SEEK ]   LINC01298 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01298 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)619344
GTEX Portal (Tissue expression)LINC01298
Human Protein AtlasENSG00000253351-LINC01298 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01298
DMDM Disease mutations619344
Blocks (Seattle)LINC01298
Human Protein Atlas [tissue]ENSG00000253351-LINC01298 [tissue]
Protein Interaction databases
FunCoupENSG00000253351
BioGRIDLINC01298
STRING (EMBL)LINC01298
ZODIACLINC01298
Ontologies - Pathways
Huge Navigator LINC01298 [HugePedia]
snp3D : Map Gene to Disease619344
BioCentury BCIQLINC01298
ClinGenLINC01298
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD619344
Chemical/Pharm GKB GenePA142672332
Clinical trialLINC01298
Miscellaneous
canSAR (ICR)LINC01298 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01298
EVEXLINC01298
GoPubMedLINC01298
iHOPLINC01298
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:23 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.