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LINC01309 (long intergenic non-protein coding RNA 1309)

Identity

Alias_symbol (synonym)TCONS_l2_00007459
Other alias
HGNC (Hugo) LINC01309
LocusID (NCBI) 104326190
Atlas_Id 76893
Location 13q33.1  [Link to chromosome band 13q33]
Location_base_pair Starts at 103425200 and ends at 103427685 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01309   50497
Cards
Entrez_Gene (NCBI)LINC01309  104326190  long intergenic non-protein coding RNA 1309
AliasesTCONS_l2_00007459
GeneCards (Weizmann)LINC01309
Ensembl hg19 (Hinxton)ENSG00000234551 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234551 [Gene_View]  chr13:103425200-103427685 [Contig_View]  LINC01309 [Vega]
ICGC DataPortalENSG00000234551
TCGA cBioPortalLINC01309
AceView (NCBI)LINC01309
Genatlas (Paris)LINC01309
WikiGenes104326190
SOURCE (Princeton)LINC01309
Genetics Home Reference (NIH)LINC01309
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01309  -     chr13:103425200-103427685 +  13q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01309  -     13q33.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01309 - 13q33.1 [CytoView hg19]  LINC01309 - 13q33.1 [CytoView hg38]
Mapping of homologs : NCBILINC01309 [Mapview hg19]  LINC01309 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA421210 BG219159
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01309
Cluster EST : UnigeneHs.736755 [ NCBI ]
CGAP (NCI)Hs.736755
Alternative Splicing GalleryENSG00000234551
Gene ExpressionLINC01309 [ NCBI-GEO ]   LINC01309 [ EBI - ARRAY_EXPRESS ]   LINC01309 [ SEEK ]   LINC01309 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01309 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104326190
GTEX Portal (Tissue expression)LINC01309
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01309
DMDM Disease mutations104326190
Blocks (Seattle)LINC01309
Human Protein AtlasENSG00000234551
Protein Interaction databases
FunCoupENSG00000234551
BioGRIDLINC01309
STRING (EMBL)LINC01309
ZODIACLINC01309
Ontologies - Pathways
Huge Navigator LINC01309 [HugePedia]
snp3D : Map Gene to Disease104326190
BioCentury BCIQLINC01309
ClinGenLINC01309
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104326190
Clinical trialLINC01309
Miscellaneous
canSAR (ICR)LINC01309 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01309
EVEXLINC01309
GoPubMedLINC01309
iHOPLINC01309
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:22:25 CEST 2017

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