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LINC01317 (long intergenic non-protein coding RNA 1317)

Identity

Other alias-
HGNC (Hugo) LINC01317
LocusID (NCBI) 104355287
Atlas_Id 76577
Location 2p22.3  [Link to chromosome band 2p22]
Location_base_pair Starts at 33931953 and ends at 34522813 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01317   50523
Cards
Entrez_Gene (NCBI)LINC01317  104355287  long intergenic non-protein coding RNA 1317
Aliases
GeneCards (Weizmann)LINC01317
Ensembl hg19 (Hinxton)ENSG00000203386 [Gene_View]  chr2:33931953-34522813 [Contig_View]  LINC01317 [Vega]
Ensembl hg38 (Hinxton)ENSG00000203386 [Gene_View]  chr2:33931953-34522813 [Contig_View]  LINC01317 [Vega]
ICGC DataPortalENSG00000203386
TCGA cBioPortalLINC01317
AceView (NCBI)LINC01317
Genatlas (Paris)LINC01317
WikiGenes104355287
SOURCE (Princeton)LINC01317
Genetics Home Reference (NIH)LINC01317
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01317  -     chr2:33931953-34522813 +  2p22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01317  -     2p22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01317 - 2p22.3 [CytoView hg19]  LINC01317 - 2p22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01317 [Mapview hg19]  LINC01317 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE410662 BQ213083 HG493821 HG493822
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)LINC01317
Cluster EST : UnigeneHs.636582 [ NCBI ]
CGAP (NCI)Hs.636582
Alternative Splicing GalleryENSG00000203386
Gene ExpressionLINC01317 [ NCBI-GEO ]   LINC01317 [ EBI - ARRAY_EXPRESS ]   LINC01317 [ SEEK ]   LINC01317 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01317 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355287
GTEX Portal (Tissue expression)LINC01317
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01317
DMDM Disease mutations104355287
Blocks (Seattle)LINC01317
Human Protein AtlasENSG00000203386
Protein Interaction databases
FunCoupENSG00000203386
BioGRIDLINC01317
STRING (EMBL)LINC01317
ZODIACLINC01317
Ontologies - Pathways
Huge Navigator LINC01317 [HugePedia]
snp3D : Map Gene to Disease104355287
BioCentury BCIQLINC01317
ClinGenLINC01317
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355287
Clinical trialLINC01317
Miscellaneous
canSAR (ICR)LINC01317 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01317
EVEXLINC01317
GoPubMedLINC01317
iHOPLINC01317
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:13:39 CET 2017

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