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LINC01318 (long intergenic non-protein coding RNA 1318)

Identity

Other alias-
HGNC (Hugo) LINC01318
LocusID (NCBI) 106144585
Atlas_Id 77777
Location 2p22.3  [Link to chromosome band 2p22]
Location_base_pair Starts at 34067226 and ends at 34069550 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01318   50524
Cards
Entrez_Gene (NCBI)LINC01318  106144585  long intergenic non-protein coding RNA 1318
Aliases
GeneCards (Weizmann)LINC01318
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:34067226-34069550 [Contig_View]  LINC01318 [Vega]
TCGA cBioPortalLINC01318
AceView (NCBI)LINC01318
Genatlas (Paris)LINC01318
WikiGenes106144585
SOURCE (Princeton)LINC01318
Genetics Home Reference (NIH)LINC01318
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01318  -     chr2:34067226-34069550 +  2p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01318  -     2p22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01318 - 2p22.3 [CytoView hg19]  LINC01318 - 2p22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01318 [Mapview hg19]  LINC01318 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB027554
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01318
Cluster EST : UnigeneHs.580486 [ NCBI ]
CGAP (NCI)Hs.580486
Gene ExpressionLINC01318 [ NCBI-GEO ]   LINC01318 [ EBI - ARRAY_EXPRESS ]   LINC01318 [ SEEK ]   LINC01318 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01318 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106144585
GTEX Portal (Tissue expression)LINC01318
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01318
DMDM Disease mutations106144585
Blocks (Seattle)LINC01318
Protein Interaction databases
BioGRIDLINC01318
STRING (EMBL)LINC01318
ZODIACLINC01318
Ontologies - Pathways
Huge Navigator LINC01318 [HugePedia]
snp3D : Map Gene to Disease106144585
BioCentury BCIQLINC01318
ClinGenLINC01318
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106144585
Clinical trialLINC01318
Miscellaneous
canSAR (ICR)LINC01318 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01318
EVEXLINC01318
GoPubMedLINC01318
iHOPLINC01318
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:38:47 CET 2017

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