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LINC01327 (long intergenic non-protein coding RNA 1327)

Identity

Alias (NCBI)TCONS_00005644
HGNC (Hugo) LINC01327
HGNC Alias symbTCONS_00005644
LocusID (NCBI) 104310350
Atlas_Id 77635
Location 3q26.1  [Link to chromosome band 3q26]
Location_base_pair Starts at 167392796 and ends at 167408519 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01327   50533
Cards
Entrez_Gene (NCBI)LINC01327    long intergenic non-protein coding RNA 1327
AliasesTCONS_00005644
GeneCards (Weizmann)LINC01327
Ensembl hg19 (Hinxton)ENSG00000241669 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241669 [Gene_View]  ENSG00000241669 [Sequence]  chr3:167392796-167408519 [Contig_View]  LINC01327 [Vega]
ICGC DataPortalENSG00000241669
TCGA cBioPortalLINC01327
AceView (NCBI)LINC01327
Genatlas (Paris)LINC01327
SOURCE (Princeton)LINC01327
Genetics Home Reference (NIH)LINC01327
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01327  -     chr3:167392796-167408519 +  3q26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01327  -     3q26.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01327 - 3q26.1 [CytoView hg19]  LINC01327 - 3q26.1 [CytoView hg38]
ImmunoBaseENSG00000241669
Genome Data Viewer NCBILINC01327 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF059162
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01327
Gene ExpressionLINC01327 [ NCBI-GEO ]   LINC01327 [ EBI - ARRAY_EXPRESS ]   LINC01327 [ SEEK ]   LINC01327 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01327 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01327 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)104310350
GTEX Portal (Tissue expression)LINC01327
Human Protein AtlasENSG00000241669-LINC01327 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01327
Human Protein Atlas [tissue]ENSG00000241669-LINC01327 [tissue]
Protein Interaction databases
BioGRIDLINC01327
STRING (EMBL)LINC01327
ZODIACLINC01327
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01327
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:37 CEST 2021

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