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LINC01330 (long intergenic non-protein coding RNA 1330)

Identity

Other alias-
HGNC (Hugo) LINC01330
LocusID (NCBI) 646168
Atlas_Id 65932
Location 3q26.2  [Link to chromosome band 3q26]
Location_base_pair Starts at 167613736 and ends at 167641797 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01330   50536
Cards
Entrez_Gene (NCBI)LINC01330  646168  long intergenic non-protein coding RNA 1330
Aliases
GeneCards (Weizmann)LINC01330
Ensembl hg19 (Hinxton)ENSG00000244227 [Gene_View]  chr3:167613736-167641797 [Contig_View]  LINC01330 [Vega]
Ensembl hg38 (Hinxton)ENSG00000244227 [Gene_View]  chr3:167613736-167641797 [Contig_View]  LINC01330 [Vega]
ICGC DataPortalENSG00000244227
TCGA cBioPortalLINC01330
AceView (NCBI)LINC01330
Genatlas (Paris)LINC01330
WikiGenes646168
SOURCE (Princeton)LINC01330
Genetics Home Reference (NIH)LINC01330
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01330  -     chr3:167613736-167641797 +  3q26.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01330  -     3q26.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01330 - 3q26.2 [CytoView hg19]  LINC01330 - 3q26.2 [CytoView hg38]
Mapping of homologs : NCBILINC01330 [Mapview hg19]  LINC01330 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093355 BC043538 BI828519 HG496283 HG496284
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LINC01330
Cluster EST : UnigeneHs.390443 [ NCBI ]
CGAP (NCI)Hs.390443
Alternative Splicing GalleryENSG00000244227
Gene ExpressionLINC01330 [ NCBI-GEO ]   LINC01330 [ EBI - ARRAY_EXPRESS ]   LINC01330 [ SEEK ]   LINC01330 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01330 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646168
GTEX Portal (Tissue expression)LINC01330
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01330
DMDM Disease mutations646168
Blocks (Seattle)LINC01330
Human Protein AtlasENSG00000244227
IPIIPI00847199   
Protein Interaction databases
FunCoupENSG00000244227
BioGRIDLINC01330
STRING (EMBL)LINC01330
ZODIACLINC01330
Ontologies - Pathways
Huge Navigator LINC01330 [HugePedia]
snp3D : Map Gene to Disease646168
BioCentury BCIQLINC01330
ClinGenLINC01330
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646168
Clinical trialLINC01330
Miscellaneous
canSAR (ICR)LINC01330 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01330
EVEXLINC01330
GoPubMedLINC01330
iHOPLINC01330
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:40 CET 2017

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