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LINC01331 (long intergenic non-protein coding RNA 1331)

Identity

Other alias-
HGNC (Hugo) LINC01331
LocusID (NCBI) 104310351
Atlas_Id 76896
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 74369376 and ends at 74536976 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01331   50538
Cards
Entrez_Gene (NCBI)LINC01331  104310351  long intergenic non-protein coding RNA 1331
Aliases
GeneCards (Weizmann)LINC01331
Ensembl hg19 (Hinxton)ENSG00000248673 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248673 [Gene_View]  chr5:74369376-74536976 [Contig_View]  LINC01331 [Vega]
ICGC DataPortalENSG00000248673
TCGA cBioPortalLINC01331
AceView (NCBI)LINC01331
Genatlas (Paris)LINC01331
WikiGenes104310351
SOURCE (Princeton)LINC01331
Genetics Home Reference (NIH)LINC01331
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01331  -     chr5:74369376-74536976 -  5q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01331  -     5q13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01331 - 5q13.3 [CytoView hg19]  LINC01331 - 5q13.3 [CytoView hg38]
Mapping of homologs : NCBILINC01331 [Mapview hg19]  LINC01331 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA145234
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01331
Cluster EST : UnigeneHs.582291 [ NCBI ]
CGAP (NCI)Hs.582291
Alternative Splicing GalleryENSG00000248673
Gene ExpressionLINC01331 [ NCBI-GEO ]   LINC01331 [ EBI - ARRAY_EXPRESS ]   LINC01331 [ SEEK ]   LINC01331 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01331 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104310351
GTEX Portal (Tissue expression)LINC01331
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01331
DMDM Disease mutations104310351
Blocks (Seattle)LINC01331
Human Protein AtlasENSG00000248673
Protein Interaction databases
FunCoupENSG00000248673
BioGRIDLINC01331
STRING (EMBL)LINC01331
ZODIACLINC01331
Ontologies - Pathways
Huge Navigator LINC01331 [HugePedia]
snp3D : Map Gene to Disease104310351
BioCentury BCIQLINC01331
ClinGenLINC01331
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104310351
Clinical trialLINC01331
Miscellaneous
canSAR (ICR)LINC01331 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01331
EVEXLINC01331
GoPubMedLINC01331
iHOPLINC01331
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:25 CEST 2017

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