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LINC01336 (long intergenic non-protein coding RNA 1336)

Identity

Other alias-
HGNC (Hugo) LINC01336
LocusID (NCBI) 104326191
Atlas_Id 77645
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 74343544 and ends at 74348468 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01336   50543
Cards
Entrez_Gene (NCBI)LINC01336  104326191  long intergenic non-protein coding RNA 1336
Aliases
GeneCards (Weizmann)LINC01336
Ensembl hg19 (Hinxton)ENSG00000250889 [Gene_View]  chr5:74343544-74348468 [Contig_View]  LINC01336 [Vega]
Ensembl hg38 (Hinxton)ENSG00000250889 [Gene_View]  chr5:74343544-74348468 [Contig_View]  LINC01336 [Vega]
ICGC DataPortalENSG00000250889
TCGA cBioPortalLINC01336
AceView (NCBI)LINC01336
Genatlas (Paris)LINC01336
WikiGenes104326191
SOURCE (Princeton)LINC01336
Genetics Home Reference (NIH)LINC01336
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01336  -     chr5:74343544-74348468 -  5q13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01336  -     5q13.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01336 - 5q13.3 [CytoView hg19]  LINC01336 - 5q13.3 [CytoView hg38]
Mapping of homologs : NCBILINC01336 [Mapview hg19]  LINC01336 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG900784 DB344036 HG498087 HG498088
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929322
Consensus coding sequences : CCDS (NCBI)LINC01336
Cluster EST : UnigeneHs.582288 [ NCBI ]
CGAP (NCI)Hs.582288
Alternative Splicing GalleryENSG00000250889
Gene ExpressionLINC01336 [ NCBI-GEO ]   LINC01336 [ EBI - ARRAY_EXPRESS ]   LINC01336 [ SEEK ]   LINC01336 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01336 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104326191
GTEX Portal (Tissue expression)LINC01336
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01336
DMDM Disease mutations104326191
Blocks (Seattle)LINC01336
Human Protein AtlasENSG00000250889
Protein Interaction databases
FunCoupENSG00000250889
BioGRIDLINC01336
STRING (EMBL)LINC01336
ZODIACLINC01336
Ontologies - Pathways
Huge Navigator LINC01336 [HugePedia]
snp3D : Map Gene to Disease104326191
BioCentury BCIQLINC01336
ClinGenLINC01336
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104326191
Clinical trialLINC01336
Miscellaneous
canSAR (ICR)LINC01336 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01336
EVEXLINC01336
GoPubMedLINC01336
iHOPLINC01336
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:13:41 CET 2017

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