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LINC01337 (long intergenic non-protein coding RNA 1337)

Identity

Alias (NCBI)TCONS_00009713
HGNC (Hugo) LINC01337
HGNC Alias symbTCONS_00009713
LocusID (NCBI) 103689917
Atlas_Id 65935
Location 5q14.1  [Link to chromosome band 5q14]
Location_base_pair Starts at 80608621 and ends at 80622524 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01337   50546
Cards
Entrez_Gene (NCBI)LINC01337    long intergenic non-protein coding RNA 1337
AliasesTCONS_00009713
GeneCards (Weizmann)LINC01337
Ensembl hg19 (Hinxton)ENSG00000251221 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251221 [Gene_View]  ENSG00000251221 [Sequence]  chr5:80608621-80622524 [Contig_View]  LINC01337 [Vega]
ICGC DataPortalENSG00000251221
TCGA cBioPortalLINC01337
AceView (NCBI)LINC01337
Genatlas (Paris)LINC01337
SOURCE (Princeton)LINC01337
Genetics Home Reference (NIH)LINC01337
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01337  -     chr5:80608621-80622524 -  5q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01337  -     5q14.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01337 - 5q14.1 [CytoView hg19]  LINC01337 - 5q14.1 [CytoView hg38]
ImmunoBaseENSG00000251221
Genome Data Viewer NCBILINC01337 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DB525610
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01337
Gene ExpressionLINC01337 [ NCBI-GEO ]   LINC01337 [ EBI - ARRAY_EXPRESS ]   LINC01337 [ SEEK ]   LINC01337 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01337 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01337 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103689917
GTEX Portal (Tissue expression)LINC01337
Human Protein AtlasENSG00000251221-LINC01337 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01337
Human Protein Atlas [tissue]ENSG00000251221-LINC01337 [tissue]
Protein Interaction databases
BioGRIDLINC01337
STRING (EMBL)LINC01337
ZODIACLINC01337
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01337
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:38 CEST 2021

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