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LINC01339 (long intergenic non-protein coding RNA 1339)

Identity

Other alias-
HGNC (Hugo) LINC01339
LocusID (NCBI) 101929495
Atlas_Id 65937
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 90158339 and ends at 90290071 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01339   50549
Cards
Entrez_Gene (NCBI)LINC01339  101929495  long intergenic non-protein coding RNA 1339
Aliases
GeneCards (Weizmann)LINC01339
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:90158339-90290071 [Contig_View]  LINC01339 [Vega]
TCGA cBioPortalLINC01339
AceView (NCBI)LINC01339
Genatlas (Paris)LINC01339
WikiGenes101929495
SOURCE (Princeton)LINC01339
Genetics Home Reference (NIH)LINC01339
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01339  -     chr5:90158339-90290071 -  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01339  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01339 - 5q14.3 [CytoView hg19]  LINC01339 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC01339 [Mapview hg19]  LINC01339 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI150213 AI682214 AW514364 BX105792
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01339
Cluster EST : UnigeneHs.346679 [ NCBI ]
CGAP (NCI)Hs.346679
Gene ExpressionLINC01339 [ NCBI-GEO ]   LINC01339 [ EBI - ARRAY_EXPRESS ]   LINC01339 [ SEEK ]   LINC01339 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01339 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929495
GTEX Portal (Tissue expression)LINC01339
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01339
DMDM Disease mutations101929495
Blocks (Seattle)LINC01339
Protein Interaction databases
BioGRIDLINC01339
STRING (EMBL)LINC01339
ZODIACLINC01339
Ontologies - Pathways
Huge Navigator LINC01339 [HugePedia]
snp3D : Map Gene to Disease101929495
BioCentury BCIQLINC01339
ClinGenLINC01339
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929495
Clinical trialLINC01339
Miscellaneous
canSAR (ICR)LINC01339 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01339
EVEXLINC01339
GoPubMedLINC01339
iHOPLINC01339
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:47 CEST 2017

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