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LINC01342 (long intergenic non-protein coding RNA 1342)

Identity

Other alias-
HGNC (Hugo) LINC01342
LocusID (NCBI) 254099
Atlas_Id 65940
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 1137017 and ends at 1144054 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01342   50551
Cards
Entrez_Gene (NCBI)LINC01342  254099  long intergenic non-protein coding RNA 1342
Aliases
GeneCards (Weizmann)LINC01342
Ensembl hg19 (Hinxton)ENSG00000223823 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223823 [Gene_View]  chr1:1137017-1144054 [Contig_View]  LINC01342 [Vega]
ICGC DataPortalENSG00000223823
TCGA cBioPortalLINC01342
AceView (NCBI)LINC01342
Genatlas (Paris)LINC01342
WikiGenes254099
SOURCE (Princeton)LINC01342
Genetics Home Reference (NIH)LINC01342
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01342  -     chr1:1137017-1144054 +  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01342  -     1p36.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01342 - 1p36.33 [CytoView hg19]  LINC01342 - 1p36.33 [CytoView hg38]
Mapping of homologs : NCBILINC01342 [Mapview hg19]  LINC01342 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028014 BC131698
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01342
Cluster EST : UnigeneHs.680488 [ NCBI ]
CGAP (NCI)Hs.680488
Alternative Splicing GalleryENSG00000223823
Gene ExpressionLINC01342 [ NCBI-GEO ]   LINC01342 [ EBI - ARRAY_EXPRESS ]   LINC01342 [ SEEK ]   LINC01342 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01342 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)254099
GTEX Portal (Tissue expression)LINC01342
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01342
DMDM Disease mutations254099
Blocks (Seattle)LINC01342
Human Protein AtlasENSG00000223823
IPIIPI00746347   
Protein Interaction databases
FunCoupENSG00000223823
BioGRIDLINC01342
STRING (EMBL)LINC01342
ZODIACLINC01342
Ontologies - Pathways
Huge Navigator LINC01342 [HugePedia]
snp3D : Map Gene to Disease254099
BioCentury BCIQLINC01342
ClinGenLINC01342
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254099
Clinical trialLINC01342
Miscellaneous
canSAR (ICR)LINC01342 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01342
EVEXLINC01342
GoPubMedLINC01342
iHOPLINC01342
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:26 CEST 2017

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