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LINC01346 (long intergenic non-protein coding RNA 1346)

Identity

Other alias-
HGNC (Hugo) LINC01346
LocusID (NCBI) 728716
Atlas_Id 65943
Location 1p36.32  [Link to chromosome band 1p36]
Location_base_pair Starts at 3940612 and ends at 3952583 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01346   50563
Cards
Entrez_Gene (NCBI)LINC01346  728716  long intergenic non-protein coding RNA 1346
Aliases
GeneCards (Weizmann)LINC01346
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:3940612-3952583 [Contig_View]  LINC01346 [Vega]
TCGA cBioPortalLINC01346
AceView (NCBI)LINC01346
Genatlas (Paris)LINC01346
WikiGenes728716
SOURCE (Princeton)LINC01346
Genetics Home Reference (NIH)LINC01346
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01346  -     chr1:3940612-3952583 +  1p36.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01346  -     1p36.32   [Description]    (hg19-Feb_2009)
EnsemblLINC01346 - 1p36.32 [CytoView hg19]  LINC01346 - 1p36.32 [CytoView hg38]
Mapping of homologs : NCBILINC01346 [Mapview hg19]  LINC01346 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124708 DB288420
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01346
Cluster EST : UnigeneHs.668359 [ NCBI ]
CGAP (NCI)Hs.668359
Gene ExpressionLINC01346 [ NCBI-GEO ]   LINC01346 [ EBI - ARRAY_EXPRESS ]   LINC01346 [ SEEK ]   LINC01346 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01346 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728716
GTEX Portal (Tissue expression)LINC01346
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01346
DMDM Disease mutations728716
Blocks (Seattle)LINC01346
Protein Interaction databases
BioGRIDLINC01346
STRING (EMBL)LINC01346
ZODIACLINC01346
Ontologies - Pathways
Huge Navigator LINC01346 [HugePedia]
snp3D : Map Gene to Disease728716
BioCentury BCIQLINC01346
ClinGenLINC01346
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728716
Clinical trialLINC01346
Miscellaneous
canSAR (ICR)LINC01346 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01346
EVEXLINC01346
GoPubMedLINC01346
iHOPLINC01346
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:00:55 CET 2017

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