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LINC01348 (long intergenic non-protein coding RNA 1348)

Identity

Other alias-
HGNC (Hugo) LINC01348
LocusID (NCBI) 731656
Atlas_Id 79476
Location 1q42.3  [Link to chromosome band 1q42]
Location_base_pair Starts at 235065474 and ends at 235069818 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01348   50567
Cards
Entrez_Gene (NCBI)LINC01348  731656  long intergenic non-protein coding RNA 1348
Aliases
GeneCards (Weizmann)LINC01348
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:235065474-235069818 [Contig_View]  LINC01348 [Vega]
TCGA cBioPortalLINC01348
AceView (NCBI)LINC01348
Genatlas (Paris)LINC01348
WikiGenes731656
SOURCE (Princeton)LINC01348
Genetics Home Reference (NIH)LINC01348
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01348  -     chr1:235065474-235069818 -  1q42.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01348  -     1q42.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01348 - 1q42.3 [CytoView hg19]  LINC01348 - 1q42.3 [CytoView hg38]
Mapping of homologs : NCBILINC01348 [Mapview hg19]  LINC01348 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA345641 AK128489 AV652367 AV719684 BX100191
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01348
Cluster EST : UnigeneHs.702477 [ NCBI ]
CGAP (NCI)Hs.702477
Gene ExpressionLINC01348 [ NCBI-GEO ]   LINC01348 [ EBI - ARRAY_EXPRESS ]   LINC01348 [ SEEK ]   LINC01348 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01348 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)731656
GTEX Portal (Tissue expression)LINC01348
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01348
DMDM Disease mutations731656
Blocks (Seattle)LINC01348
IPIIPI00443571   
Protein Interaction databases
BioGRIDLINC01348
STRING (EMBL)LINC01348
ZODIACLINC01348
Ontologies - Pathways
Huge Navigator LINC01348 [HugePedia]
snp3D : Map Gene to Disease731656
BioCentury BCIQLINC01348
ClinGenLINC01348
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD731656
Clinical trialLINC01348
Miscellaneous
canSAR (ICR)LINC01348 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01348
EVEXLINC01348
GoPubMedLINC01348
iHOPLINC01348
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:38:52 CET 2017

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