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LINC01372 (long intergenic non-protein coding RNA 1372)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01372
LocusID (NCBI) 101929736
Atlas_Id 65963
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 67335976 and ends at 67340026 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01372   50623
Cards
Entrez_Gene (NCBI)LINC01372  101929736  long intergenic non-protein coding RNA 1372
Aliases
GeneCards (Weizmann)LINC01372
Ensembl hg19 (Hinxton)ENSG00000106610 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106610 [Gene_View]  ENSG00000106610 [Sequence]  chr7:67335976-67340026 [Contig_View]  LINC01372 [Vega]
ICGC DataPortalENSG00000106610
TCGA cBioPortalLINC01372
AceView (NCBI)LINC01372
Genatlas (Paris)LINC01372
WikiGenes101929736
SOURCE (Princeton)LINC01372
Genetics Home Reference (NIH)LINC01372
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01372  -     chr7:67335976-67340026 +  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01372  -     7q11.21   [Description]    (hg19-Feb_2009)
GoldenPathLINC01372 - 7q11.21 [CytoView hg19]  LINC01372 - 7q11.21 [CytoView hg38]
ImmunoBaseENSG00000106610
genome Data Viewer NCBILINC01372 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC017910
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01372
Alternative Splicing GalleryENSG00000106610
Gene ExpressionLINC01372 [ NCBI-GEO ]   LINC01372 [ EBI - ARRAY_EXPRESS ]   LINC01372 [ SEEK ]   LINC01372 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01372 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01372 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929736
GTEX Portal (Tissue expression)LINC01372
Human Protein AtlasENSG00000106610-LINC01372 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01372
DMDM Disease mutations101929736
Blocks (Seattle)LINC01372
Human Protein Atlas [tissue]ENSG00000106610-LINC01372 [tissue]
Protein Interaction databases
FunCoupENSG00000106610
BioGRIDLINC01372
STRING (EMBL)LINC01372
ZODIACLINC01372
Ontologies - Pathways
Huge Navigator LINC01372 [HugePedia]
snp3D : Map Gene to Disease101929736
BioCentury BCIQLINC01372
ClinGenLINC01372
Clinical trials, drugs, therapy
Protein Interactions : CTD101929736
Clinical trialLINC01372
Miscellaneous
canSAR (ICR)LINC01372 (select the gene name)
HarmonizomeLINC01372
DataMed IndexLINC01372
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01372
EVEXLINC01372
GoPubMedLINC01372
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:17:12 CEST 2020

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