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LINC01374 (long intergenic non-protein coding RNA 1374)

Identity

Alias (NCBI)TCONS_00018278
HGNC (Hugo) LINC01374
LocusID (NCBI) 105378425
Atlas_Id 80280
Location 10q23.31  [Link to chromosome band 10q23]
Location_base_pair Starts at 89853906 and ends at 89914956 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)LINC01374   50631
Cards
Entrez_Gene (NCBI)LINC01374    long intergenic non-protein coding RNA 1374
AliasesTCONS_00018278
GeneCards (Weizmann)LINC01374
Ensembl hg19 (Hinxton)ENSG00000280560 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280560 [Gene_View]  ENSG00000280560 [Sequence]  chr10:89853906-89914956 [Contig_View]  LINC01374 [Vega]
ICGC DataPortalENSG00000280560
TCGA cBioPortalLINC01374
AceView (NCBI)LINC01374
Genatlas (Paris)LINC01374
SOURCE (Princeton)LINC01374
Genetics Home Reference (NIH)LINC01374
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01374  -     chr10:89853906-89914956 +  10q23.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01374  -     10q23.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC01374 - 10q23.31 [CytoView hg19]  LINC01374 - 10q23.31 [CytoView hg38]
ImmunoBaseENSG00000280560
Genome Data Viewer NCBILINC01374 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI126223 BX100282
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01374
Gene ExpressionLINC01374 [ NCBI-GEO ]   LINC01374 [ EBI - ARRAY_EXPRESS ]   LINC01374 [ SEEK ]   LINC01374 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01374 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01374 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105378425
GTEX Portal (Tissue expression)LINC01374
Human Protein AtlasENSG00000280560-LINC01374 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01374
Human Protein Atlas [tissue]ENSG00000280560-LINC01374 [tissue]
Protein Interaction databases
BioGRIDLINC01374
STRING (EMBL)LINC01374
ZODIACLINC01374
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01374
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:57:44 CEST 2021
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