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LINC01377 (long intergenic non-protein coding RNA 1377)

Identity

Other alias-
HGNC (Hugo) LINC01377
LocusID (NCBI) 102467074
Atlas_Id 65966
Location 5p15.33  [Link to chromosome band 5p15]
Location_base_pair Starts at 3177949 and ends at 3181346 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01377   50642
Cards
Entrez_Gene (NCBI)LINC01377  102467074  long intergenic non-protein coding RNA 1377
Aliases
GeneCards (Weizmann)LINC01377
Ensembl hg19 (Hinxton)ENSG00000249808 [Gene_View]  chr5:3177949-3181346 [Contig_View]  LINC01377 [Vega]
Ensembl hg38 (Hinxton)ENSG00000249808 [Gene_View]  chr5:3177949-3181346 [Contig_View]  LINC01377 [Vega]
ICGC DataPortalENSG00000249808
TCGA cBioPortalLINC01377
AceView (NCBI)LINC01377
Genatlas (Paris)LINC01377
WikiGenes102467074
SOURCE (Princeton)LINC01377
Genetics Home Reference (NIH)LINC01377
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01377  -     chr5:3177949-3181346 +  5p15.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01377  -     5p15.33   [Description]    (hg38-Dec_2013)
EnsemblLINC01377 - 5p15.33 [CytoView hg19]  LINC01377 - 5p15.33 [CytoView hg38]
Mapping of homologs : NCBILINC01377 [Mapview hg19]  LINC01377 [Mapview hg38]
Gene and transcription
Genbank (Entrez)HG497680 HY010738
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)LINC01377
Cluster EST : UnigeneHs.575250 [ NCBI ]
CGAP (NCI)Hs.575250
Alternative Splicing GalleryENSG00000249808
Gene ExpressionLINC01377 [ NCBI-GEO ]   LINC01377 [ EBI - ARRAY_EXPRESS ]   LINC01377 [ SEEK ]   LINC01377 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01377 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102467074
GTEX Portal (Tissue expression)LINC01377
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01377
DMDM Disease mutations102467074
Blocks (Seattle)LINC01377
Human Protein AtlasENSG00000249808
Protein Interaction databases
FunCoupENSG00000249808
BioGRIDLINC01377
STRING (EMBL)LINC01377
ZODIACLINC01377
Ontologies - Pathways
Huge Navigator LINC01377 [HugePedia]
snp3D : Map Gene to Disease102467074
BioCentury BCIQLINC01377
ClinGenLINC01377
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102467074
Clinical trialLINC01377
Miscellaneous
canSAR (ICR)LINC01377 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01377
EVEXLINC01377
GoPubMedLINC01377
iHOPLINC01377
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:48 CET 2017

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