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LINC01392 (long intergenic non-protein coding RNA 1392)

Identity

Other alias-
HGNC (Hugo) LINC01392
LocusID (NCBI) 104355291
Atlas_Id 77246
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 115123599 and ends at 115231355 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01392   50668
Cards
Entrez_Gene (NCBI)LINC01392  104355291  long intergenic non-protein coding RNA 1392
Aliases
GeneCards (Weizmann)LINC01392
Ensembl hg19 (Hinxton)ENSG00000233607 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233607 [Gene_View]  chr7:115123599-115231355 [Contig_View]  LINC01392 [Vega]
ICGC DataPortalENSG00000233607
TCGA cBioPortalLINC01392
AceView (NCBI)LINC01392
Genatlas (Paris)LINC01392
WikiGenes104355291
SOURCE (Princeton)LINC01392
Genetics Home Reference (NIH)LINC01392
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01392  -     chr7:115123599-115231355 -  7q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01392  -     7q31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01392 - 7q31.2 [CytoView hg19]  LINC01392 - 7q31.2 [CytoView hg38]
Mapping of homologs : NCBILINC01392 [Mapview hg19]  LINC01392 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA452608
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01392
Alternative Splicing GalleryENSG00000233607
Gene ExpressionLINC01392 [ NCBI-GEO ]   LINC01392 [ EBI - ARRAY_EXPRESS ]   LINC01392 [ SEEK ]   LINC01392 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01392 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355291
GTEX Portal (Tissue expression)LINC01392
Human Protein AtlasENSG00000233607-LINC01392 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01392
DMDM Disease mutations104355291
Blocks (Seattle)LINC01392
Human Protein Atlas [tissue]ENSG00000233607-LINC01392 [tissue]
Protein Interaction databases
FunCoupENSG00000233607
BioGRIDLINC01392
STRING (EMBL)LINC01392
ZODIACLINC01392
Ontologies - Pathways
Huge Navigator LINC01392 [HugePedia]
snp3D : Map Gene to Disease104355291
BioCentury BCIQLINC01392
ClinGenLINC01392
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355291
Clinical trialLINC01392
Miscellaneous
canSAR (ICR)LINC01392 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01392
EVEXLINC01392
GoPubMedLINC01392
iHOPLINC01392
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:38:59 CET 2017

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