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LINC01393 (long intergenic non-protein coding RNA 1393)

Identity

Other alias-
HGNC (Hugo) LINC01393
LocusID (NCBI) 102724386
Atlas_Id 65970
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 115078958 and ends at 115126314 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01393   50669
Cards
Entrez_Gene (NCBI)LINC01393  102724386  long intergenic non-protein coding RNA 1393
Aliases
GeneCards (Weizmann)LINC01393
Ensembl hg19 (Hinxton)ENSG00000225535 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225535 [Gene_View]  chr7:115078958-115126314 [Contig_View]  LINC01393 [Vega]
ICGC DataPortalENSG00000225535
TCGA cBioPortalLINC01393
AceView (NCBI)LINC01393
Genatlas (Paris)LINC01393
WikiGenes102724386
SOURCE (Princeton)LINC01393
Genetics Home Reference (NIH)LINC01393
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01393  -     chr7:115078958-115126314 +  7q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01393  -     7q31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01393 - 7q31.2 [CytoView hg19]  LINC01393 - 7q31.2 [CytoView hg38]
Mapping of homologs : NCBILINC01393 [Mapview hg19]  LINC01393 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC022431
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01393
Cluster EST : UnigeneHs.352357 [ NCBI ]
CGAP (NCI)Hs.352357
Alternative Splicing GalleryENSG00000225535
Gene ExpressionLINC01393 [ NCBI-GEO ]   LINC01393 [ EBI - ARRAY_EXPRESS ]   LINC01393 [ SEEK ]   LINC01393 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01393 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724386
GTEX Portal (Tissue expression)LINC01393
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01393
DMDM Disease mutations102724386
Blocks (Seattle)LINC01393
Human Protein AtlasENSG00000225535
Protein Interaction databases
FunCoupENSG00000225535
BioGRIDLINC01393
STRING (EMBL)LINC01393
ZODIACLINC01393
Ontologies - Pathways
Huge Navigator LINC01393 [HugePedia]
snp3D : Map Gene to Disease102724386
BioCentury BCIQLINC01393
ClinGenLINC01393
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724386
Clinical trialLINC01393
Miscellaneous
canSAR (ICR)LINC01393 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01393
EVEXLINC01393
GoPubMedLINC01393
iHOPLINC01393
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:55 CEST 2017

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