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LINC01396 (long intergenic non-protein coding RNA 1396)

Identity

Other alias-
HGNC (Hugo) LINC01396
LocusID (NCBI) 103695434
Atlas_Id 65972
Location 4p16.2  [Link to chromosome band 4p16]
Location_base_pair Starts at 4844437 and ends at 4850827 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01396   50675
Cards
Entrez_Gene (NCBI)LINC01396  103695434  long intergenic non-protein coding RNA 1396
Aliases
GeneCards (Weizmann)LINC01396
Ensembl hg19 (Hinxton)ENSG00000273396 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000273396 [Gene_View]  chr4:4844437-4850827 [Contig_View]  LINC01396 [Vega]
ICGC DataPortalENSG00000273396
TCGA cBioPortalLINC01396
AceView (NCBI)LINC01396
Genatlas (Paris)LINC01396
WikiGenes103695434
SOURCE (Princeton)LINC01396
Genetics Home Reference (NIH)LINC01396
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01396  -     chr4:4844437-4850827 +  4p16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01396  -     4p16.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01396 - 4p16.2 [CytoView hg19]  LINC01396 - 4p16.2 [CytoView hg38]
Mapping of homologs : NCBILINC01396 [Mapview hg19]  LINC01396 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW195733
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01396
Cluster EST : UnigeneHs.550830 [ NCBI ]
CGAP (NCI)Hs.550830
Alternative Splicing GalleryENSG00000273396
Gene ExpressionLINC01396 [ NCBI-GEO ]   LINC01396 [ EBI - ARRAY_EXPRESS ]   LINC01396 [ SEEK ]   LINC01396 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01396 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103695434
GTEX Portal (Tissue expression)LINC01396
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01396
DMDM Disease mutations103695434
Blocks (Seattle)LINC01396
Human Protein AtlasENSG00000273396
Protein Interaction databases
FunCoupENSG00000273396
BioGRIDLINC01396
STRING (EMBL)LINC01396
ZODIACLINC01396
Ontologies - Pathways
Huge Navigator LINC01396 [HugePedia]
snp3D : Map Gene to Disease103695434
BioCentury BCIQLINC01396
ClinGenLINC01396
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103695434
Clinical trialLINC01396
Miscellaneous
canSAR (ICR)LINC01396 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01396
EVEXLINC01396
GoPubMedLINC01396
iHOPLINC01396
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:32 CEST 2017

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