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LINC01398 (long intergenic non-protein coding RNA 1398)

Identity

Other alias-
HGNC (Hugo) LINC01398
LocusID (NCBI) 101929651
Atlas_Id 65973
Location 1p33  [Link to chromosome band 1p33]
Location_base_pair Starts at 46446673 and ends at 46449704 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01398   50678
Cards
Entrez_Gene (NCBI)LINC01398  101929651  long intergenic non-protein coding RNA 1398
Aliases
GeneCards (Weizmann)LINC01398
Ensembl hg19 (Hinxton)ENSG00000224863 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224863 [Gene_View]  chr1:46446673-46449704 [Contig_View]  LINC01398 [Vega]
ICGC DataPortalENSG00000224863
TCGA cBioPortalLINC01398
AceView (NCBI)LINC01398
Genatlas (Paris)LINC01398
WikiGenes101929651
SOURCE (Princeton)LINC01398
Genetics Home Reference (NIH)LINC01398
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01398  -     chr1:46446673-46449704 -  1p33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01398  -     1p33   [Description]    (hg19-Feb_2009)
EnsemblLINC01398 - 1p33 [CytoView hg19]  LINC01398 - 1p33 [CytoView hg38]
Mapping of homologs : NCBILINC01398 [Mapview hg19]  LINC01398 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC021746
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01398
Cluster EST : UnigeneHs.638707 [ NCBI ]
CGAP (NCI)Hs.638707
Alternative Splicing GalleryENSG00000224863
Gene ExpressionLINC01398 [ NCBI-GEO ]   LINC01398 [ EBI - ARRAY_EXPRESS ]   LINC01398 [ SEEK ]   LINC01398 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01398 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929651
GTEX Portal (Tissue expression)LINC01398
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01398
DMDM Disease mutations101929651
Blocks (Seattle)LINC01398
Human Protein AtlasENSG00000224863
Protein Interaction databases
FunCoupENSG00000224863
BioGRIDLINC01398
STRING (EMBL)LINC01398
ZODIACLINC01398
Ontologies - Pathways
Huge Navigator LINC01398 [HugePedia]
snp3D : Map Gene to Disease101929651
BioCentury BCIQLINC01398
ClinGenLINC01398
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929651
Clinical trialLINC01398
Miscellaneous
canSAR (ICR)LINC01398 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01398
EVEXLINC01398
GoPubMedLINC01398
iHOPLINC01398
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:56 CEST 2017

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