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LINC01399 (long intergenic non-protein coding RNA 1399)

Identity

Other alias-
HGNC (Hugo) LINC01399
LocusID (NCBI) 104310353
Atlas_Id 77137
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 35515817 and ends at 35627049 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01399   50680
Cards
Entrez_Gene (NCBI)LINC01399  104310353  long intergenic non-protein coding RNA 1399
Aliases
GeneCards (Weizmann)LINC01399
Ensembl hg19 (Hinxton)ENSG00000233080 [Gene_View]  chr22:35515817-35627049 [Contig_View]  LINC01399 [Vega]
Ensembl hg38 (Hinxton)ENSG00000233080 [Gene_View]  chr22:35515817-35627049 [Contig_View]  LINC01399 [Vega]
ICGC DataPortalENSG00000233080
TCGA cBioPortalLINC01399
AceView (NCBI)LINC01399
Genatlas (Paris)LINC01399
WikiGenes104310353
SOURCE (Princeton)LINC01399
Genetics Home Reference (NIH)LINC01399
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01399  -     chr22:35515817-35627049 -  22q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01399  -     22q12.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01399 - 22q12.3 [CytoView hg19]  LINC01399 - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01399 [Mapview hg19]  LINC01399 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB111670 HG512262
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)LINC01399
Cluster EST : UnigeneHs.581009 [ NCBI ]
CGAP (NCI)Hs.581009
Alternative Splicing GalleryENSG00000233080
Gene ExpressionLINC01399 [ NCBI-GEO ]   LINC01399 [ EBI - ARRAY_EXPRESS ]   LINC01399 [ SEEK ]   LINC01399 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01399 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104310353
GTEX Portal (Tissue expression)LINC01399
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01399
DMDM Disease mutations104310353
Blocks (Seattle)LINC01399
Human Protein AtlasENSG00000233080
Protein Interaction databases
FunCoupENSG00000233080
BioGRIDLINC01399
STRING (EMBL)LINC01399
ZODIACLINC01399
Ontologies - Pathways
Huge Navigator LINC01399 [HugePedia]
snp3D : Map Gene to Disease104310353
BioCentury BCIQLINC01399
ClinGenLINC01399
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104310353
Clinical trialLINC01399
Miscellaneous
canSAR (ICR)LINC01399 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01399
EVEXLINC01399
GoPubMedLINC01399
iHOPLINC01399
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:13:51 CET 2017

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