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LINC01402 (long intergenic non-protein coding RNA 1402)

Identity

Alias_symbol (synonym)TCONS_00017087
Other aliasGS1-421I3.4
HGNC (Hugo) LINC01402
LocusID (NCBI) 104797536
Atlas_Id 77215
Location Xq24  [Link to chromosome band Xq24]
Location_base_pair Starts at 120117642 and ends at 120119700 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01402   50685
Cards
Entrez_Gene (NCBI)LINC01402  104797536  long intergenic non-protein coding RNA 1402
AliasesGS1-421I3.4; TCONS_00017087
GeneCards (Weizmann)LINC01402
Ensembl hg19 (Hinxton)ENSG00000228139 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228139 [Gene_View]  chrX:120117642-120119700 [Contig_View]  LINC01402 [Vega]
ICGC DataPortalENSG00000228139
TCGA cBioPortalLINC01402
AceView (NCBI)LINC01402
Genatlas (Paris)LINC01402
WikiGenes104797536
SOURCE (Princeton)LINC01402
Genetics Home Reference (NIH)LINC01402
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01402  -     chrX:120117642-120119700 -  Xq24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01402  -     Xq24   [Description]    (hg19-Feb_2009)
EnsemblLINC01402 - Xq24 [CytoView hg19]  LINC01402 - Xq24 [CytoView hg38]
Mapping of homologs : NCBILINC01402 [Mapview hg19]  LINC01402 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA360663
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01402
Alternative Splicing GalleryENSG00000228139
Gene ExpressionLINC01402 [ NCBI-GEO ]   LINC01402 [ EBI - ARRAY_EXPRESS ]   LINC01402 [ SEEK ]   LINC01402 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01402 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104797536
GTEX Portal (Tissue expression)LINC01402
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01402
DMDM Disease mutations104797536
Blocks (Seattle)LINC01402
Human Protein AtlasENSG00000228139
Protein Interaction databases
FunCoupENSG00000228139
BioGRIDLINC01402
STRING (EMBL)LINC01402
ZODIACLINC01402
Ontologies - Pathways
Huge Navigator LINC01402 [HugePedia]
snp3D : Map Gene to Disease104797536
BioCentury BCIQLINC01402
ClinGenLINC01402
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104797536
Clinical trialLINC01402
Miscellaneous
canSAR (ICR)LINC01402 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01402
EVEXLINC01402
GoPubMedLINC01402
iHOPLINC01402
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:32 CEST 2017

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