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LINC01405 (long intergenic non-protein coding RNA 1405)

Identity

Other alias-
HGNC (Hugo) LINC01405
LocusID (NCBI) 100131138
Atlas_Id 65974
Location 12q24.11  [Link to chromosome band 12q24]
Location_base_pair Starts at 110936602 and ends at 110937446 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01405   50688
Cards
Entrez_Gene (NCBI)LINC01405  100131138  long intergenic non-protein coding RNA 1405
Aliases
GeneCards (Weizmann)LINC01405
Ensembl hg19 (Hinxton)ENSG00000185847 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185847 [Gene_View]  chr12:110936602-110937446 [Contig_View]  LINC01405 [Vega]
ICGC DataPortalENSG00000185847
TCGA cBioPortalLINC01405
AceView (NCBI)LINC01405
Genatlas (Paris)LINC01405
WikiGenes100131138
SOURCE (Princeton)LINC01405
Genetics Home Reference (NIH)LINC01405
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01405  -     chr12:110936602-110937446 +  12q24.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01405  -     12q24.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01405 - 12q24.11 [CytoView hg19]  LINC01405 - 12q24.11 [CytoView hg38]
Mapping of homologs : NCBILINC01405 [Mapview hg19]  LINC01405 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ276555 AW015651
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01405
Cluster EST : UnigeneHs.152129 [ NCBI ]
CGAP (NCI)Hs.152129
Alternative Splicing GalleryENSG00000185847
Gene ExpressionLINC01405 [ NCBI-GEO ]   LINC01405 [ EBI - ARRAY_EXPRESS ]   LINC01405 [ SEEK ]   LINC01405 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01405 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131138
GTEX Portal (Tissue expression)LINC01405
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01405
DMDM Disease mutations100131138
Blocks (Seattle)LINC01405
Human Protein AtlasENSG00000185847
IPIIPI00217074   
Protein Interaction databases
FunCoupENSG00000185847
BioGRIDLINC01405
STRING (EMBL)LINC01405
ZODIACLINC01405
Ontologies - Pathways
Huge Navigator LINC01405 [HugePedia]
snp3D : Map Gene to Disease100131138
BioCentury BCIQLINC01405
ClinGenLINC01405
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131138
Clinical trialLINC01405
Miscellaneous
canSAR (ICR)LINC01405 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01405
EVEXLINC01405
GoPubMedLINC01405
iHOPLINC01405
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:32 CEST 2017

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