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LINC01410 (long intergenic non-protein coding RNA 1410)

Identity

Other alias-
HGNC (Hugo) LINC01410
LocusID (NCBI) 103352539
Atlas_Id 65975
Location 9q13  [Link to chromosome band 9q13]
Location_base_pair Starts at 62801465 and ends at 62813486 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01410   50702
Cards
Entrez_Gene (NCBI)LINC01410  103352539  long intergenic non-protein coding RNA 1410
Aliases
GeneCards (Weizmann)LINC01410
Ensembl hg19 (Hinxton)ENSG00000238113 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238113 [Gene_View]  chr9:62801465-62813486 [Contig_View]  LINC01410 [Vega]
ICGC DataPortalENSG00000238113
TCGA cBioPortalLINC01410
AceView (NCBI)LINC01410
Genatlas (Paris)LINC01410
WikiGenes103352539
SOURCE (Princeton)LINC01410
Genetics Home Reference (NIH)LINC01410
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01410  -     chr9:62801465-62813486 +  9q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01410  -     9q13   [Description]    (hg19-Feb_2009)
EnsemblLINC01410 - 9q13 [CytoView hg19]  LINC01410 - 9q13 [CytoView hg38]
Mapping of homologs : NCBILINC01410 [Mapview hg19]  LINC01410 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039680 CR627148
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01410
Cluster EST : UnigeneHs.351215 [ NCBI ]
CGAP (NCI)Hs.351215
Alternative Splicing GalleryENSG00000238113
Gene ExpressionLINC01410 [ NCBI-GEO ]   LINC01410 [ EBI - ARRAY_EXPRESS ]   LINC01410 [ SEEK ]   LINC01410 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01410 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103352539
GTEX Portal (Tissue expression)LINC01410
Human Protein AtlasENSG00000238113-LINC01410 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01410
DMDM Disease mutations103352539
Blocks (Seattle)LINC01410
Human Protein Atlas [tissue]ENSG00000238113-LINC01410 [tissue]
Protein Interaction databases
FunCoupENSG00000238113
BioGRIDLINC01410
STRING (EMBL)LINC01410
ZODIACLINC01410
Ontologies - Pathways
Huge Navigator LINC01410 [HugePedia]
snp3D : Map Gene to Disease103352539
BioCentury BCIQLINC01410
ClinGenLINC01410
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103352539
Clinical trialLINC01410
Miscellaneous
canSAR (ICR)LINC01410 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01410
EVEXLINC01410
GoPubMedLINC01410
iHOPLINC01410
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:56:15 CET 2017

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