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LINC01411 (long intergenic non-protein coding RNA 1411)

Identity

Alias_symbol (synonym)RP11-267A15.1
Other alias-
HGNC (Hugo) LINC01411
LocusID (NCBI) 101928176
Atlas_Id 65976
Location 5q35.2  [Link to chromosome band 5q35]
Location_base_pair Starts at 173763357 and ends at 173954142 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01411   50703
Cards
Entrez_Gene (NCBI)LINC01411  101928176  long intergenic non-protein coding RNA 1411
Aliases
GeneCards (Weizmann)LINC01411
Ensembl hg19 (Hinxton) [Gene_View]  chr5:173763357-173954142 [Contig_View]  LINC01411 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:173763357-173954142 [Contig_View]  LINC01411 [Vega]
TCGA cBioPortalLINC01411
AceView (NCBI)LINC01411
Genatlas (Paris)LINC01411
WikiGenes101928176
SOURCE (Princeton)LINC01411
Genetics Home Reference (NIH)LINC01411
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01411  -     chr5:173763357-173954142 +  5q35.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01411  -     5q35.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01411 - 5q35.2 [CytoView hg19]  LINC01411 - 5q35.2 [CytoView hg38]
Mapping of homologs : NCBILINC01411 [Mapview hg19]  LINC01411 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG330133 BM051440 BU620825 BX110485 DA346958
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)LINC01411
Cluster EST : UnigeneHs.436014 [ NCBI ]
CGAP (NCI)Hs.436014
Gene ExpressionLINC01411 [ NCBI-GEO ]   LINC01411 [ EBI - ARRAY_EXPRESS ]   LINC01411 [ SEEK ]   LINC01411 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01411 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928176
GTEX Portal (Tissue expression)LINC01411
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01411
DMDM Disease mutations101928176
Blocks (Seattle)LINC01411
Protein Interaction databases
BioGRIDLINC01411
STRING (EMBL)LINC01411
ZODIACLINC01411
Ontologies - Pathways
Huge Navigator LINC01411 [HugePedia]
snp3D : Map Gene to Disease101928176
BioCentury BCIQLINC01411
ClinGenLINC01411
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928176
Clinical trialLINC01411
Miscellaneous
canSAR (ICR)LINC01411 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01411
EVEXLINC01411
GoPubMedLINC01411
iHOPLINC01411
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:52 CET 2017

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