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LINC01412 (long intergenic non-protein coding RNA 1412)

Identity

Other alias-
HGNC (Hugo) LINC01412
LocusID (NCBI) 101928455
Atlas_Id 65977
Location 2q22.3  [Link to chromosome band 2q22]
Location_base_pair Starts at 144521868 and ends at 144579434 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01412   50704
Cards
Entrez_Gene (NCBI)LINC01412  101928455  long intergenic non-protein coding RNA 1412
Aliases
GeneCards (Weizmann)LINC01412
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:144521868-144579434 [Contig_View]  LINC01412 [Vega]
TCGA cBioPortalLINC01412
AceView (NCBI)LINC01412
Genatlas (Paris)LINC01412
WikiGenes101928455
SOURCE (Princeton)LINC01412
Genetics Home Reference (NIH)LINC01412
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01412  -     chr2:144521868-144579434 +  2q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01412  -     2q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01412 - 2q22.3 [CytoView hg19]  LINC01412 - 2q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01412 [Mapview hg19]  LINC01412 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI671392 HY038051
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01412
Cluster EST : UnigeneHs.333693 [ NCBI ]
CGAP (NCI)Hs.333693
Gene ExpressionLINC01412 [ NCBI-GEO ]   LINC01412 [ EBI - ARRAY_EXPRESS ]   LINC01412 [ SEEK ]   LINC01412 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01412 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928455
GTEX Portal (Tissue expression)LINC01412
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01412
DMDM Disease mutations101928455
Blocks (Seattle)LINC01412
Protein Interaction databases
BioGRIDLINC01412
STRING (EMBL)LINC01412
ZODIACLINC01412
Ontologies - Pathways
Huge Navigator LINC01412 [HugePedia]
snp3D : Map Gene to Disease101928455
BioCentury BCIQLINC01412
ClinGenLINC01412
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928455
Clinical trialLINC01412
Miscellaneous
canSAR (ICR)LINC01412 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01412
EVEXLINC01412
GoPubMedLINC01412
iHOPLINC01412
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:03 CET 2017

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