Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01415 (long intergenic non-protein coding RNA 1415)

Identity

Alias (NCBI)TCONS_00026208
HGNC (Hugo) LINC01415
HGNC Alias symbTCONS_00026208
LocusID (NCBI) 100132501
Atlas_Id 65979
Location 18q21.2  [Link to chromosome band 18q21]
Location_base_pair Starts at 55774601 and ends at 55780750 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01415   50709
Cards
Entrez_Gene (NCBI)LINC01415    long intergenic non-protein coding RNA 1415
AliasesTCONS_00026208
GeneCards (Weizmann)LINC01415
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr18:55774601-55780750 [Contig_View]  LINC01415 [Vega]
TCGA cBioPortalLINC01415
AceView (NCBI)LINC01415
Genatlas (Paris)LINC01415
SOURCE (Princeton)LINC01415
Genetics Home Reference (NIH)LINC01415
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01415  -     chr18:55774601-55780750 -  18q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01415  -     18q21.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01415 - 18q21.2 [CytoView hg19]  LINC01415 - 18q21.2 [CytoView hg38]
Genome Data Viewer NCBILINC01415 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK127787
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01415
Gene ExpressionLINC01415 [ NCBI-GEO ]   LINC01415 [ EBI - ARRAY_EXPRESS ]   LINC01415 [ SEEK ]   LINC01415 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01415 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01415 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132501
GTEX Portal (Tissue expression)LINC01415
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01415
Protein Interaction databases
BioGRIDLINC01415
STRING (EMBL)LINC01415
ZODIACLINC01415
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01415
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:49 CEST 2021

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