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LINC01416 (long intergenic non-protein coding RNA 1416)

Identity

Other alias-
HGNC (Hugo) LINC01416
LocusID (NCBI) 101927273
Atlas_Id 67097
Location 18q21.2  [Link to chromosome band 18q21]
Location_base_pair Starts at 55881688 and ends at 55920199 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01416   51645
Cards
Entrez_Gene (NCBI)LINC01416  101927273  long intergenic non-protein coding RNA 1416
Aliases
GeneCards (Weizmann)LINC01416
Ensembl hg19 (Hinxton)ENSG00000260930 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260930 [Gene_View]  chr18:55881688-55920199 [Contig_View]  LINC01416 [Vega]
ICGC DataPortalENSG00000260930
TCGA cBioPortalLINC01416
AceView (NCBI)LINC01416
Genatlas (Paris)LINC01416
WikiGenes101927273
SOURCE (Princeton)LINC01416
Genetics Home Reference (NIH)LINC01416
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01416  -     chr18:55881688-55920199 -  18q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01416  -     18q21.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01416 - 18q21.2 [CytoView hg19]  LINC01416 - 18q21.2 [CytoView hg38]
Mapping of homologs : NCBILINC01416 [Mapview hg19]  LINC01416 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043263
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01416
Cluster EST : UnigeneHs.434335 [ NCBI ]
CGAP (NCI)Hs.434335
Alternative Splicing GalleryENSG00000260930
Gene ExpressionLINC01416 [ NCBI-GEO ]   LINC01416 [ EBI - ARRAY_EXPRESS ]   LINC01416 [ SEEK ]   LINC01416 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01416 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927273
GTEX Portal (Tissue expression)LINC01416
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01416
DMDM Disease mutations101927273
Blocks (Seattle)LINC01416
Human Protein AtlasENSG00000260930
Protein Interaction databases
FunCoupENSG00000260930
BioGRIDLINC01416
STRING (EMBL)LINC01416
ZODIACLINC01416
Ontologies - Pathways
Huge Navigator LINC01416 [HugePedia]
snp3D : Map Gene to Disease101927273
BioCentury BCIQLINC01416
ClinGenLINC01416
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927273
Clinical trialLINC01416
Miscellaneous
canSAR (ICR)LINC01416 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01416
EVEXLINC01416
GoPubMedLINC01416
iHOPLINC01416
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:58 CEST 2017

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