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LINC01422 (long intergenic non-protein coding RNA 1422)

Identity

Other alias-
HGNC (Hugo) LINC01422
LocusID (NCBI) 101929539
Atlas_Id 65982
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 27299255 and ends at 27316573 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01422   50728
Cards
Entrez_Gene (NCBI)LINC01422  101929539  long intergenic non-protein coding RNA 1422
Aliases
GeneCards (Weizmann)LINC01422
Ensembl hg19 (Hinxton)ENSG00000235271 [Gene_View]  chr22:27299255-27316573 [Contig_View]  LINC01422 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235271 [Gene_View]  chr22:27299255-27316573 [Contig_View]  LINC01422 [Vega]
ICGC DataPortalENSG00000235271
TCGA cBioPortalLINC01422
AceView (NCBI)LINC01422
Genatlas (Paris)LINC01422
WikiGenes101929539
SOURCE (Princeton)LINC01422
Genetics Home Reference (NIH)LINC01422
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01422  -     chr22:27299255-27316573 +  22q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01422  -     22q12.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01422 - 22q12.1 [CytoView hg19]  LINC01422 - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC01422 [Mapview hg19]  LINC01422 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX647841 CA335834 DA768843 HG512168 HG512169
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)LINC01422
Cluster EST : UnigeneHs.639900 [ NCBI ]
CGAP (NCI)Hs.639900
Alternative Splicing GalleryENSG00000235271
Gene ExpressionLINC01422 [ NCBI-GEO ]   LINC01422 [ EBI - ARRAY_EXPRESS ]   LINC01422 [ SEEK ]   LINC01422 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01422 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929539
GTEX Portal (Tissue expression)LINC01422
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01422
DMDM Disease mutations101929539
Blocks (Seattle)LINC01422
Human Protein AtlasENSG00000235271
Protein Interaction databases
FunCoupENSG00000235271
BioGRIDLINC01422
STRING (EMBL)LINC01422
ZODIACLINC01422
Ontologies - Pathways
Huge Navigator LINC01422 [HugePedia]
snp3D : Map Gene to Disease101929539
BioCentury BCIQLINC01422
ClinGenLINC01422
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929539
Clinical trialLINC01422
Miscellaneous
canSAR (ICR)LINC01422 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01422
EVEXLINC01422
GoPubMedLINC01422
iHOPLINC01422
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:53 CET 2017

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